Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f15
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48055-7|CAO78722.1|  452|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z68213-5|CAA92434.1|  512|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z92777-9|CAJ58495.1|  396|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AC006684-6|AAF39964.1|  361|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z48055-7|CAO78722.1|  452|Caenorhabditis elegans Hypothetical
           protein T07A5.7 protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 426 KSIYSTCIDNKMNYGVNINEYEKQLQRYQHTLNIAQTEKKNAIRKQMLTK-AFKLKLLE 599
           +  Y T  ++K      IN Y  +  R  H++NIA+ E K  I +  + K   + KLLE
Sbjct: 334 RQAYITATNDKALKKSKINTYGSRKSRALHSMNIAELELKKCILQFKIKKFERREKLLE 392


>Z68213-5|CAA92434.1|  512|Caenorhabditis elegans Hypothetical
           protein C01F6.1 protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/73 (24%), Positives = 38/73 (52%)
 Frame = +3

Query: 378 FSLTSNNQELDDLELSKSIYSTCIDNKMNYGVNINEYEKQLQRYQHTLNIAQTEKKNAIR 557
           FSL  + + ++ +  +++IY    D      +N+N   +++QRY+ T+N+  +  K  I 
Sbjct: 29  FSLDKDMEVVEKVAETEAIYGQS-DAFFTEKLNLNYRIEKMQRYRVTINVLNSSTK-TIM 86

Query: 558 KQMLTKAFKLKLL 596
             M T  F + ++
Sbjct: 87  GSMGTADFDISMM 99


>Z92777-9|CAJ58495.1|  396|Caenorhabditis elegans Hypothetical
           protein C17H1.14 protein.
          Length = 396

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 486 YEKQLQRY--QHTLNIAQTEKKNAIRKQMLTKAFKLKLLE 599
           +E+ +Q +  QH L +   EKK+ I K    KA +  +LE
Sbjct: 195 FEEDMQEHELQHQLKLENIEKKSEIDKANFDKAVRADILE 234


>AC006684-6|AAF39964.1|  361|Caenorhabditis elegans Hypothetical
           protein T02H6.5 protein.
          Length = 361

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 10/54 (18%), Positives = 24/54 (44%)
 Frame = +3

Query: 420 LSKSIYSTCIDNKMNYGVNINEYEKQLQRYQHTLNIAQTEKKNAIRKQMLTKAF 581
           + KSIY   IDN+  Y +    ++ ++ R++   +      +    K++    +
Sbjct: 57  VKKSIYKIVIDNRFEYNIIYPRFKTRILRFEKKSDFVSVYNEMGTNKEITASVY 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,948,413
Number of Sequences: 27780
Number of extensions: 195297
Number of successful extensions: 660
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)