Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f15
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    26   0.33 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    24   1.00 
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   3.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   3.0  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   9.3  

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 453 NKMNYGVNINEYEKQLQRYQHTLNIAQ 533
           N  NY  N N Y K+L    + +NI Q
Sbjct: 325 NNNNYKYNYNNYNKKLYYKNYIINIEQ 351


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 435 YSTCIDNKMNYGVNINEYEKQLQRYQHTLNIAQ 533
           Y    +NK NY  N N Y K+L    + +NI Q
Sbjct: 96  YKYNYNNKYNY--NNNNYNKKLYYKNYIINIEQ 126


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 408 DDLELSKSIYSTCIDN 455
           DD++L K I + CI+N
Sbjct: 103 DDIQLVKGIANECIEN 118


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 408 DDLELSKSIYSTCIDN 455
           DD++L K I + CI+N
Sbjct: 103 DDIQLVKGIANECIEN 118


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = -2

Query: 231 CHRSIVE*HHFHTH 190
           CH+     HH  TH
Sbjct: 15  CHKRFTRDHHLKTH 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,590
Number of Sequences: 438
Number of extensions: 2678
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)