Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f14
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   3.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.3  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 500 TVVKDQRILVQAGRLLPQQEEMDVRARLRCPYPHSWKEGRL 622
           TVVK   ++   G +     E+D+   + C +  SW++ RL
Sbjct: 62  TVVKTNILIRSMGPV----SELDMDYSMDCYFRQSWRDSRL 98


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 382 TSAAPITIQLRTTP 423
           TSA P TI+ R TP
Sbjct: 327 TSARPTTIETRVTP 340


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 568 IHLLLLR*QASSLYQYPLIFNNC 500
           I  LL+R ++ SL  + L+F NC
Sbjct: 134 IIFLLIRFKSFSLLNFNLLFFNC 156


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 607 PAVWIRAPQSRAHIHL 560
           PAV ++  QS+ H+HL
Sbjct: 660 PAVIVQHTQSQLHLHL 675


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 214 STSDQLAAVCTWSPTDIYFTKTEAHILVASR 306
           ST   L A    +PT+  +   EAHI VA +
Sbjct: 138 STLYALGAKIIRTPTEASWHSPEAHISVAQK 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,468
Number of Sequences: 438
Number of extensions: 4269
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)