Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21f10
(595 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL589765-12|CAI17173.2| 66|Homo sapiens ornithine decarboxylas... 33 1.0
AB209253-1|BAD92490.1| 458|Homo sapiens two pore segment channe... 31 4.1
BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 29 9.4
BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 29 9.4
BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein. 29 9.4
BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 29 9.4
AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens ... 29 9.4
AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens ... 29 9.4
AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens ... 29 9.4
AF266280-2|AAG44702.1| 97|Homo sapiens mitogaligin protein. 29 9.4
AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein. 29 9.4
AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein. 29 9.4
>AL589765-12|CAI17173.2| 66|Homo sapiens ornithine decarboxylase
antizyme 3 protein.
Length = 66
Score = 32.7 bits (71), Expect = 1.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 417 ALWSMRALRSVSIPLPVWSMRALWALPIPGPL 512
A W++R +++P W+M +LW +P+ G L
Sbjct: 14 ATWALRWSDQITLPSLPWTMSSLWCIPLKGML 45
>AB209253-1|BAD92490.1| 458|Homo sapiens two pore segment channel 2
variant protein.
Length = 458
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 348 MSMWSLWAVRSVPWTVSSVRAMRALWSMRALRSVSIPLPVWSMRALWALPIPGPLWSLWS 527
+S+W + + ++ +R + ++ M + S + L V +MRA + +PGP L +
Sbjct: 385 LSLWDMTRMLNMLIVFRFLRIIPSMKPMAVVASTVLGL-VQNMRAFGGILVPGPCQWLGA 443
Query: 528 LWSVR 542
LW +R
Sbjct: 444 LWELR 448
>BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 252 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 310
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 311 SRSRSHQRSRHSSRDRSRERSKRRS 335
>BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 252 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 310
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 311 SRSRSHQRSRHSSRDRSRERSKRRS 335
>BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein.
Length = 391
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 251 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 309
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 310 SRSRSHQRSRHSSRDRSRERSKRRS 334
>BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 252 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 310
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 311 SRSRSHQRSRHSSRDRSRERSKRRS 335
>AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12833 fis, clone NT2RP2003157, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 252 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 310
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 311 SRSRSHQRSRHSSRDRSRERSKRRS 335
>AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10657 fis, clone NT2RP2006043, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 252 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 310
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 311 SRSRSHQRSRHSSRDRSRERSKRRS 335
>AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10614 fis, clone NT2RP2005436, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 252 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 310
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 311 SRSRSHQRSRHSSRDRSRERSKRRS 335
>AF266280-2|AAG44702.1| 97|Homo sapiens mitogaligin protein.
Length = 97
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 375 RSVPWTVSSVRAMRALWSM-RALRSVSIPLPV---WSMRALWALPIPGPLWSLWSLW 533
R + WT +S R + WS+ R+ + S+P W + W P L W LW
Sbjct: 31 RGLSWTGTSRRLPWSTWSLSRSTCTWSLPRATQRPWGLPIFWTAKCPRSLPCHWPLW 87
>AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein.
Length = 402
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 252 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 310
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 311 SRSRSHQRSRHSSRDRSRERSKRRS 335
>AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein.
Length = 383
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 550 RKVRTDHRDHRDH-KGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDR 374
R+ R R R H K P ++ + R H + + +RK R K+R R + + R
Sbjct: 243 REEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 301
Query: 373 TAHRDHMDIRN*DSPLSSRPSSQRN 299
+ R H R+ S S +R+
Sbjct: 302 SRSRSHQRSRHSSRDRSRERSKRRS 326
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,655,342
Number of Sequences: 237096
Number of extensions: 1338533
Number of successful extensions: 3708
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3701
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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