SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f09
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110813-1|AAI10814.1|  519|Homo sapiens cAMP responsive element...    31   2.9  
AK131517-1|BAD18659.1|  460|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AJ549387-1|CAD79347.1|  519|Homo sapiens basic transcription fac...    31   2.9  
AJ549094-1|CAD79344.1|  396|Homo sapiens FUS/BBF2H7 protein prot...    31   2.9  
AJ549093-1|CAD79343.1|  396|Homo sapiens FUS/BBF2H7 protein prot...    31   2.9  
AJ549092-1|CAD79342.1|  519|Homo sapiens basic transcription fac...    31   2.9  
DQ128105-1|AAZ42189.1|  272|Homo sapiens HCF-binding transcripti...    29   8.9  
BC093798-1|AAH93798.1|  272|Homo sapiens CREBZF protein protein.       29   8.9  
BC093796-1|AAH93796.1|  272|Homo sapiens CREBZF protein protein.       29   8.9  
BC060807-1|AAH60807.1|  354|Homo sapiens CREB/ATF bZIP transcrip...    29   8.9  
AF039942-1|AAD28325.1|  272|Homo sapiens HCF-binding transcripti...    29   8.9  

>BC110813-1|AAI10814.1|  519|Homo sapiens cAMP responsive element
           binding protein 3-like 2 protein.
          Length = 519

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 357 VRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMER 509
           +R +++  + +   R   K YM  LE+++ + + ENL  R    VL+   R
Sbjct: 297 IRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 347


>AK131517-1|BAD18659.1|  460|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16743 fis, clone CTONG2003348, moderately
           similar to Mus musculus mRNA for OASIS protein. ).
          Length = 460

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 357 VRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMER 509
           +R +++  + +   R   K YM  LE+++ + + ENL  R    VL+   R
Sbjct: 298 IRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 348


>AJ549387-1|CAD79347.1|  519|Homo sapiens basic transcription factor
           2 homologue protein.
          Length = 519

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 357 VRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMER 509
           +R +++  + +   R   K YM  LE+++ + + ENL  R    VL+   R
Sbjct: 297 IRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 347


>AJ549094-1|CAD79344.1|  396|Homo sapiens FUS/BBF2H7 protein
           protein.
          Length = 396

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 357 VRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMER 509
           +R +++  + +   R   K YM  LE+++ + + ENL  R    VL+   R
Sbjct: 174 IRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 224


>AJ549093-1|CAD79343.1|  396|Homo sapiens FUS/BBF2H7 protein
           protein.
          Length = 396

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 357 VRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMER 509
           +R +++  + +   R   K YM  LE+++ + + ENL  R    VL+   R
Sbjct: 174 IRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 224


>AJ549092-1|CAD79342.1|  519|Homo sapiens basic transcription factor
           2 homologue protein.
          Length = 519

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 357 VRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMER 509
           +R +++  + +   R   K YM  LE+++ + + ENL  R    VL+   R
Sbjct: 297 IRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 347


>DQ128105-1|AAZ42189.1|  272|Homo sapiens HCF-binding transcription
           factor Zhangfei protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +3

Query: 387 SNLVRLTDKNYMTELEERIRAVNEENL-----NKRISSRV--LDEMERLKRLILVGKTPL 545
           + L RL  K Y+  LE R+R +  EN      N+ +  RV  L E  R  R +L  +T L
Sbjct: 136 ARLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESRYLRAVLANETGL 195


>BC093798-1|AAH93798.1|  272|Homo sapiens CREBZF protein protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +3

Query: 387 SNLVRLTDKNYMTELEERIRAVNEENL-----NKRISSRV--LDEMERLKRLILVGKTPL 545
           + L RL  K Y+  LE R+R +  EN      N+ +  RV  L E  R  R +L  +T L
Sbjct: 136 ARLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESRYLRAVLANETGL 195


>BC093796-1|AAH93796.1|  272|Homo sapiens CREBZF protein protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +3

Query: 387 SNLVRLTDKNYMTELEERIRAVNEENL-----NKRISSRV--LDEMERLKRLILVGKTPL 545
           + L RL  K Y+  LE R+R +  EN      N+ +  RV  L E  R  R +L  +T L
Sbjct: 136 ARLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESRYLRAVLANETGL 195


>BC060807-1|AAH60807.1|  354|Homo sapiens CREB/ATF bZIP
           transcription factor protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +3

Query: 387 SNLVRLTDKNYMTELEERIRAVNEENL-----NKRISSRV--LDEMERLKRLILVGKTPL 545
           + L RL  K Y+  LE R+R +  EN      N+ +  RV  L E  R  R +L  +T L
Sbjct: 218 ARLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESRYLRAVLANETGL 277


>AF039942-1|AAD28325.1|  272|Homo sapiens HCF-binding transcription
           factor Zhangfei protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +3

Query: 387 SNLVRLTDKNYMTELEERIRAVNEENL-----NKRISSRV--LDEMERLKRLILVGKTPL 545
           + L RL  K Y+  LE R+R +  EN      N+ +  RV  L E  R  R +L  +T L
Sbjct: 136 ARLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESRYLRAVLANETGL 195


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,242,773
Number of Sequences: 237096
Number of extensions: 1254399
Number of successful extensions: 8158
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8158
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -