Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f08
         (263 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    21   1.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   1.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   2.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   2.6  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   3.4  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   3.4  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    21   3.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   3.4  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    19   7.8  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    19   7.8  

>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 78  LEKNVHYRRSLTDR 119
           LEK  HY R LT R
Sbjct: 23  LEKEFHYNRYLTRR 36


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 78  LEKNVHYRRSLTDR 119
           LEK  HY R LT R
Sbjct: 285 LEKEFHYNRYLTRR 298


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -3

Query: 237 LNTN*IIFYYFNYPG*LPSHSLHKDYQ*ASYPSGTTH-DSIY 115
           +N   + FYY+ Y G   +HS+ +     S   G  H D  Y
Sbjct: 431 VNRQPVWFYYYTYKG---AHSISEIMSGTSNKYGVCHADDAY 469


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -3

Query: 237 LNTN*IIFYYFNYPG*LPSHSLHKDYQ*ASYPSGTTH-DSIY 115
           +N   + FYY+ Y G   +HS+ +     S   G  H D  Y
Sbjct: 431 VNRQPVWFYYYTYKG---AHSISEIMSGTSNKYGVCHADDAY 469


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 202 LSGIASKPFTS*GLPVSLISLW 137
           + G++ KP +  G  + +I++W
Sbjct: 155 VKGLSGKPLSINGALIRIIAIW 176


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 202 LSGIASKPFTS*GLPVSLISLW 137
           + G++ KP +  G  + +I++W
Sbjct: 121 VKGLSGKPLSINGALIRIIAIW 142


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 202 LSGIASKPFTS*GLPVSLISLW 137
           + G++ KP +  G  + +I++W
Sbjct: 31  VKGLSGKPLSINGALIRIIAIW 52


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 139 WYNARLHLSVSERL*CTFFSRRINNSTTNDTY 44
           W++   H+SV+++L      + I NS   D Y
Sbjct: 156 WHSPEAHISVAQKL-----QKEIPNSIILDQY 182


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 78  LEKNVHYRRSLTDR 119
           LEK  HY   LT R
Sbjct: 23  LEKEFHYNHYLTRR 36


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 184 WKLSRIIEVVKYYLV 228
           W L ++  ++ YYLV
Sbjct: 279 WFLHKMKNIIDYYLV 293


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,510
Number of Sequences: 438
Number of extensions: 1225
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)