Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f07
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   5.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   9.5  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -1

Query: 255 AISLES*PRQTLERRTAIFIFVTYHRAAWSTHDCSKIQANGGG 127
           A+ L    R  +E+  A ++ + YH + ++T    ++ A+G G
Sbjct: 186 AMELRDRHRMPIEQ-IATWVCIAYHESRFNTSAEGRLNADGSG 227



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = -1

Query: 219 ERRTAIFIFVTYHRAAWSTHDCSKIQANGGG 127
           + + A ++ + YH + ++T    ++ A+G G
Sbjct: 361 KEQVATWVCIAYHESRFNTSAEGRLNADGSG 391


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 479  LRCFHRPTFFSKTVVLRGGYHCD 411
            L C +RP F  +  + RGG   D
Sbjct: 1551 LYCLNRPFFPERYTIFRGGSQFD 1573


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +2

Query: 128 PPPFACILLQSCVLHAALWYVTNMKIAVLRSSVC---LGQLSSEMAYKTASFFNKVRFAT 298
           P    C LL + V  + + Y   +    L +  C   L ++  + A + A  F  VR+ T
Sbjct: 786 PKTSRCRLL-AAVADSTMRYAAPVWHGALTNRECRSLLKRVQRKAAIRVARTFRTVRYET 844

Query: 299 CAVPA 313
             +PA
Sbjct: 845 AVLPA 849


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,448
Number of Sequences: 2352
Number of extensions: 8977
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)