Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f06
         (627 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD...    27   1.2  
AY052027-1|AAK93451.1|  387|Drosophila melanogaster LD47649p pro...    27   1.3  

>AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD,
            isoform D protein.
          Length = 1135

 Score = 27.5 bits (58), Expect(2) = 1.2
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
 Frame = +1

Query: 172  PSSNLPHNIIG------EGDVVAIVSSGGVLQYFFTPVTHGIHCPTNAPYG---LPYW-- 318
            PSS +  NI G      +  +  + +   ++Q  F P   G+  PT  P G   +P    
Sbjct: 875  PSSGVGANISGSDMGFNDNMLTGLGAGPNLMQNPFDPFMGGMPAPTGMPPGPNMMPNQVP 934

Query: 319  NANKPLWF--VRSIGDPFHIQPYPNSPEGVIFNRYNIISDSQPVQPF 453
            N    +W   +  +G P  + P  N P G   +  N+  ++ P Q F
Sbjct: 935  NGTPQIWQNQMGPVGGPPGVPPMMNGPGGPGMDMSNMNMNNMPPQNF 981



 Score = 22.2 bits (45), Expect(2) = 1.2
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +1

Query: 37  IHNITDNKNGLIN*YDKINTNASVQSNNKMQFQPLMPCNAPHFAPPSSNLPHNI 198
           + N+ D+ NG ++   ++  +    +   + F P M  ++P  A    +  H+I
Sbjct: 791 VDNVPDHPNGNLSKQRQVQMDREATTLRALYFSPDMIPDSPAEAELEPHFAHDI 844


>AY052027-1|AAK93451.1|  387|Drosophila melanogaster LD47649p
           protein.
          Length = 387

 Score = 27.5 bits (58), Expect(2) = 1.3
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
 Frame = +1

Query: 172 PSSNLPHNIIG------EGDVVAIVSSGGVLQYFFTPVTHGIHCPTNAPYG---LPYW-- 318
           PSS +  NI G      +  +  + +   ++Q  F P   G+  PT  P G   +P    
Sbjct: 127 PSSGVGANISGSDMGFNDNMLTGLGAGPNLMQNPFDPFMGGMPAPTGMPPGPNMMPNQVP 186

Query: 319 NANKPLWF--VRSIGDPFHIQPYPNSPEGVIFNRYNIISDSQPVQPF 453
           N    +W   +  +G P  + P  N P G   +  N+  ++ P Q F
Sbjct: 187 NGTPQIWQNQMGPVGGPPGVPPMMNGPGGPGMDMSNMNMNNMPPQNF 233



 Score = 22.2 bits (45), Expect(2) = 1.3
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +1

Query: 37  IHNITDNKNGLIN*YDKINTNASVQSNNKMQFQPLMPCNAPHFAPPSSNLPHNI 198
           + N+ D+ NG ++   ++  +    +   + F P M  ++P  A    +  H+I
Sbjct: 43  VDNVPDHPNGNLSKQRQVQMDREATTLRALYFSPDMIPDSPAEAELEPHFAHDI 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,774,490
Number of Sequences: 53049
Number of extensions: 685743
Number of successful extensions: 1720
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)