Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21f05
         (581 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical ...    54   6e-08
Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical pr...    54   7e-08
AL021481-5|CAA16336.2|  455|Caenorhabditis elegans Hypothetical ...    54   7e-08
Z97191-2|CAB10025.1|  481|Caenorhabditis elegans Hypothetical pr...    47   8e-06
U28928-5|AAQ01535.1|  434|Caenorhabditis elegans Hypothetical pr...    47   8e-06
U28928-4|AAA68337.2|  489|Caenorhabditis elegans Hypothetical pr...    47   8e-06
AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical...    42   3e-04
AL021474-3|CAD54163.1|  519|Caenorhabditis elegans Hypothetical ...    30   1.4  
U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical p...    28   4.2  
Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical p...    28   4.2  
U80839-17|AAB37921.1|  372|Caenorhabditis elegans Serpentine rec...    28   5.6  
Z70038-7|CAA93886.2|  373|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical...    27   7.4  
AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein p...    27   7.4  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF040645-14|AAB94979.1|  779|Caenorhabditis elegans Hypothetical...    27   9.7  

>AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical
           protein T27A1.5 protein.
          Length = 449

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = +2

Query: 254 ESIGHLIKSCLGGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYMLARSAQRIYGKIQ 433
           +++ H+IK  +G G++++  ++K  G+W   +L  F+     YC   L      I    +
Sbjct: 43  QALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTRQLIFGQHYITFIKR 102

Query: 434 VPALSYPDLAEASLAVGP-WDNMRKYSKCFRYLVDLTITMDLFGACCVY 577
              + Y ++  +++ +GP W  +R +   F+ +V++ + +  FG CCVY
Sbjct: 103 EQRMDYANVMRSAVELGPAW--IRGHGYLFKQMVNINMFVAQFGFCCVY 149


>Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical
           protein F59B2.2 protein.
          Length = 460

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
 Frame = +2

Query: 224 RPPAKTTNVI---ESIGHLIKSCLGGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYM 394
           +PPA++ +VI    ++  L KS    G  ++  ++K  GLW +FV++F +     Y  ++
Sbjct: 28  QPPARSGDVITPTRAVLTLSKSMFNAGCFSLPYAWKLGGLWVSFVMSFVIAGLNWYGNHI 87

Query: 395 LARSAQRIYGKIQVPALSYPDLAEASLAVGPWDNMRKYSKCFRYLVDLTITMDLFGACCV 574
           L R++Q +  K    AL Y   A+          +R  SK   Y V++TI     G C V
Sbjct: 88  LVRASQHLAKKSDRSALDYGHFAKKVCDYSDIRFLRNNSKAVMYFVNVTILFYQLGMCSV 147


>AL021481-5|CAA16336.2|  455|Caenorhabditis elegans Hypothetical
           protein Y43F4B.7 protein.
          Length = 455

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
 Frame = +2

Query: 266 HLIKSCLGGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYMLARSAQRIYGKIQVPAL 445
           H++K+ LG G++++  ++K  GL+   +L   +     YCM  +  +A  +  +     +
Sbjct: 57  HMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMRQVVFAAHFVCNRNGRDLI 116

Query: 446 SYPDLAEASLAVG-PWDNMRKYSKCFRYLVDLTITMDLFGACCVY 577
            Y ++   ++ +G PW  +++    F+ LV++ + +   G CCVY
Sbjct: 117 DYANIMRGAVEMGPPW--IKRNGYFFKQLVNVNMFISQLGFCCVY 159


>Z97191-2|CAB10025.1|  481|Caenorhabditis elegans Hypothetical
           protein H32K16.1 protein.
          Length = 481

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
 Frame = +2

Query: 233 AKTTNVIESIG--HLIKSCLGGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYMLARS 406
           A+ T +  + G  + I   +G G  ++  S+KQ GLW    L F +GF   Y M+ +   
Sbjct: 58  ARKTGISATSGLINFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNC 117

Query: 407 AQRIYGKIQVPALSYPDLAEASLAVGPWDNMRKYSKCFRYLVDLTITMDLFGACCVY 577
           +Q +       +L Y ++AEA++    +   RK+ K  + +++  +     G   V+
Sbjct: 118 SQYLAKSNGDQSLDYGEMAEAAMQ-NSYKWARKHGKLAKIVINACLLAFQLGVITVF 173


>U28928-5|AAQ01535.1|  434|Caenorhabditis elegans Hypothetical
           protein C44B7.6b protein.
          Length = 434

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 29/104 (27%), Positives = 50/104 (48%)
 Frame = +2

Query: 266 HLIKSCLGGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYMLARSAQRIYGKIQVPAL 445
           +L+K  LG G  ++  ++KQ G  +  V+   LGF  A CM  L + A  +    Q   L
Sbjct: 29  NLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPL 88

Query: 446 SYPDLAEASLAVGPWDNMRKYSKCFRYLVDLTITMDLFGACCVY 577
            Y ++A  +     +  +RK +   R LV+ ++ +   G CC +
Sbjct: 89  DYGNMAYKATQAS-YTPIRKLAPVSRALVNSSLCILQLGICCCF 131


>U28928-4|AAA68337.2|  489|Caenorhabditis elegans Hypothetical
           protein C44B7.6a protein.
          Length = 489

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 29/104 (27%), Positives = 50/104 (48%)
 Frame = +2

Query: 266 HLIKSCLGGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYMLARSAQRIYGKIQVPAL 445
           +L+K  LG G  ++  ++KQ G  +  V+   LGF  A CM  L + A  +    Q   L
Sbjct: 84  NLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPL 143

Query: 446 SYPDLAEASLAVGPWDNMRKYSKCFRYLVDLTITMDLFGACCVY 577
            Y ++A  +     +  +RK +   R LV+ ++ +   G CC +
Sbjct: 144 DYGNMAYKATQAS-YTPIRKLAPVSRALVNSSLCILQLGICCCF 186


>AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical
           protein Y38H6C.17 protein.
          Length = 454

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
 Frame = +2

Query: 200 KNYDFTKARPPAKTTNVIESIG--------HLIKSCLGGGIVAIHESYKQCGLWTAFVLN 355
           +NYD  + R  A  + V+   G        + +   +G G  ++  S+KQ GLW  F   
Sbjct: 13  QNYDSIEFRKNAGGSIVVRKTGISATSGLINFVCGMMGPGCFSLAVSFKQAGLWGGFASV 72

Query: 356 FFLGFCVAYCMYMLARSAQRIYGKIQVPALSYPDLAEASLAVGPWDNMRKYSKCFRYLVD 535
           F +G    Y M+ +   +Q +  K     L Y ++A++++    +   +KY K  + +V+
Sbjct: 73  FIIGGLSLYSMHKIVNCSQFLSEKKGDQKLDYGEMAKSAME-NSYGWAKKYGKIAKVVVN 131

Query: 536 LTITMDLFGACCV 574
             +     G   V
Sbjct: 132 TCLLAFQLGVITV 144


>AL021474-3|CAD54163.1|  519|Caenorhabditis elegans Hypothetical
           protein Y32F6A.4 protein.
          Length = 519

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 287 GGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYMLARS 406
           GGGIVA+  +  Q   WT  ++   L   V Y  Y+L  S
Sbjct: 70  GGGIVALPTAIIQAEFWTGLIVCVILIGVVTYTAYVLGLS 109


>U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical
           protein F21D12.3 protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +2

Query: 269 LIKSCLGGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYMLARSAQRIYGK---IQVP 439
           +I   +GGG+VA+  ++K  GL    ++   +     Y  Y+L +   +I  +   I V 
Sbjct: 53  IIADMVGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGKVWNKIMERNPHIGVC 112

Query: 440 ALSYPDLAEASLAVGPWDNMRKYS 511
              +P++A+ ++      NM++++
Sbjct: 113 RKPFPEMAKRTMGT----NMQRFT 132


>Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 254 ESIGHLIKSCLGGGIVAI-HESYKQCG--LWTAFVLNFFLGFCVAYCMYMLARSA 409
           ESI HL    + G I  I  E +K  G  LW   +L F   +C   C YML  S+
Sbjct: 401 ESIQHL--ELMDGLIEQILDEKWKAYGRALWLRSLLGFIFFYCCFVCAYMLRPSS 453


>Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 254 ESIGHLIKSCLGGGIVAI-HESYKQCG--LWTAFVLNFFLGFCVAYCMYMLARSA 409
           ESI HL    + G I  I  E +K  G  LW   +L F   +C   C YML  S+
Sbjct: 401 ESIQHL--ELMDGLIEQILDEKWKAYGRALWLRSLLGFIFFYCCFVCAYMLRPSS 453


>U80839-17|AAB37921.1|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein97 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 296 IVAIHESYKQCGLWTAFVLNFFLGFCVAYCMYMLARSAQRIYGKIQV 436
           I+ + E + +  LW  F L+FF      + +Y+L R A  I   I +
Sbjct: 27  ILLLLEQFARPSLWFQFYLSFFGILLTIFHLYILTRKAMMISSIIAI 73


>Z70038-7|CAA93886.2|  373|Caenorhabditis elegans Hypothetical
           protein ZK1067.7 protein.
          Length = 373

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 518 NTCCISSCCPRVRRLGTLQPDQDMTMQVLGFCHISSEQSVPAYTC 384
           N  C SSC     ++  LQP Q+      G C  S +Q+ P   C
Sbjct: 126 NNQCSSSCGNSAPQIVVLQPQQNQ----CGSCQSSCQQTCPTCNC 166


>AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical
           protein Y116A8C.32 protein.
          Length = 699

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 413 RIYGKIQVPALSYPDLAEASLAVGPWDNMRK 505
           R++ K+ +P   +PDL    L +GP  N  K
Sbjct: 302 RLHDKVWIPQEQFPDLNFVGLLIGPRGNTLK 332


>AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein
           protein.
          Length = 699

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 413 RIYGKIQVPALSYPDLAEASLAVGPWDNMRK 505
           R++ K+ +P   +PDL    L +GP  N  K
Sbjct: 302 RLHDKVWIPQEQFPDLNFVGLLIGPRGNTLK 332


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 242  TNVIESIGHLIKS-CLGGGIVAIHESYKQCGLWTAFVLNFFLGFCVAYC 385
            T V+ES   LI+  C  G   A HE +K C L+    + F     V YC
Sbjct: 2685 TPVLESNTSLIEGDCPAGWFQAGHEEFKSCFLFVPSAVTF--SRAVEYC 2731


>AF040645-14|AAB94979.1|  779|Caenorhabditis elegans Hypothetical
           protein F52C6.14 protein.
          Length = 779

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 396 WHALLRGYMAKSKYLHCHILI 458
           WH++L+G M K + + C  LI
Sbjct: 461 WHSVLKGQMGKKRRIRCDKLI 481


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,815,708
Number of Sequences: 27780
Number of extensions: 283080
Number of successful extensions: 741
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)