Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21e24
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   3.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   7.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.2  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   9.5  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   9.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.5  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
 Frame = -1

Query: 573 HQFSATG---VFPSCNGLGTRLTAIPP 502
           H FSA     +  SCN LG  +  +PP
Sbjct: 363 HHFSAASQRFMLRSCNSLGDHIPPLPP 389


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -1

Query: 582 CVKHQFSATGVFPSCNGLGTRLTAIPPAPFEETRAD 475
           CV+ Q   TG     N   T  T   P P E+   D
Sbjct: 687 CVQCQQYKTGPLAEANECATNCTLFVPIPVEKVTID 722


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 324 NEVSSSTVFPERYEGSFFNRAPNDFQCEGSG 232
           + V    +  ++  GS  N APND    G+G
Sbjct: 487 SSVQDLRILQKKVHGSVVNLAPNDGPPHGAG 517


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -1

Query: 504 PAPFEETRADCGEGAPPPDPPTHSLPEP 421
           P+P     AD     PPP PP  S   P
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLSP 796


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 492 EETRADCGEGAPPPDPPTHSLPEP 421
           ++ R      A  P PPTH L +P
Sbjct: 905 QQHRGPGAAAATGPPPPTHRLEQP 928


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 516 TAIPPAPFEETRADCGEGAPPPDPP 442
           TA+  A  ++ +    EG  PP+PP
Sbjct: 84  TALRRAQTQDEQRALNEGEVPPEPP 108


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 516 TAIPPAPFEETRADCGEGAPPPDPP 442
           TA+  A  ++ +    EG  PP+PP
Sbjct: 84  TALRRAQTQDEQRALNEGEVPPEPP 108


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 464 PSPQSARVSSNGAGGMAVSRVPSPLHDGNTP 556
           PSP +    S G+GG +       LH G  P
Sbjct: 89  PSPGAGGTGSGGSGGGSGGIGSGALHLGQNP 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,705
Number of Sequences: 2352
Number of extensions: 9900
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)