Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21e23
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 80 1e-15
U88180-6|AAB42300.1| 373|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF100657-3|AAC68961.1| 335|Caenorhabditis elegans Hypothetical ... 30 1.5
U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical pr... 29 4.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 4.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.4
Z81074-10|CAB03036.1| 278|Caenorhabditis elegans Hypothetical p... 28 5.9
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 28 5.9
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 80.2 bits (189), Expect = 1e-15
Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Frame = +3
Query: 3 PLQYISFDRTMQDIVYKLVPDLQDNELKRERDFYRARGLPCPKDTA---------LAADK 155
P Y+++DR + ++V + VP +++NEL + F R DTA L ++
Sbjct: 350 PTHYVTYDRAVNELVNQFVPKMENNELDVRKTFLRDCREALGIDTAAEDRERKERLERER 409
Query: 156 PTGDE---PEQPDNTDCHRKDEQVNVCLECISTSLRTLKRSFIRCSAQATITHLKKFVAK 326
TG P + HR D QV V L + +L + R ++RCS T+ LKKF++
Sbjct: 410 ITGTNRCYPLERPRFSHHRDDCQVTVNLLPGTANLPLITRPYVRCSEMTTMNTLKKFLSL 469
Query: 327 KVLNGIDQYREIDILCNDELLGKDHTLKFVYVTRWRF--RDPPLRLQY 464
++ + +Y ++D+ C+ +L+GKD +++FV++ + R + PL ++Y
Sbjct: 470 QIWDDQSRYSDLDMFCDGQLMGKDFSVRFVWMMKRRGQPKSEPLIIRY 517
>U88180-6|AAB42300.1| 373|Caenorhabditis elegans Hypothetical
protein T27A3.7 protein.
Length = 373
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 63 DLQDNELKRERDFYRARGLPCPKDTALAADKPTGDEPEQPDNT 191
+L NE+ ++ D +A G+P +DT + P D P+ P T
Sbjct: 291 NLSLNEVLKQIDTKKATGVPRSRDTVARSPSPDSDVPKAPSRT 333
>AF100657-3|AAC68961.1| 335|Caenorhabditis elegans Hypothetical
protein F52C12.3 protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/74 (33%), Positives = 31/74 (41%)
Frame = +1
Query: 97 TSIVPVDCLVLRTLPSLQTSLQEMSLSNPTTLTAIEKMNRSMSVWNVYQHHYEHSKEVSF 276
TS V+ L L L S+QTS +L PT R S W HH + +E F
Sbjct: 174 TSPALVNFLPLEMLESIQTSTILQNLKPPTPN---RPPCRPPSYWPFVDHHVTNWQEFRF 230
Query: 277 DAQLRRQ*HTSRNL 318
A+ RQ R L
Sbjct: 231 QAEQARQETVLRRL 244
>U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical
protein F18A1.5 protein.
Length = 655
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 224 LFGMYINIITNTQKKFHSMLSSGDNNTPQEICS*ESIEWNRPIQR-D*HIVQ*RITRQGP 400
L+ Y N+ T+ K S + G N P+ I + +++ + + D V+ ITR P
Sbjct: 451 LYDWYANVKPTTEVKMMSQAAGGSNEAPRTIAGLQEMQFGKDSDKGDYATVKAMITRVNP 510
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 4.4
Identities = 29/118 (24%), Positives = 52/118 (44%)
Frame = +3
Query: 24 DRTMQDIVYKLVPDLQDNELKRERDFYRARGLPCPKDTALAADKPTGDEPEQPDNTDCHR 203
D+ Q+ KL D +D++LK+E D L KD L K D + + D +
Sbjct: 8415 DKLKQEADAKLKKD-KDDKLKQEAD----AKLKKDKDDKL---KQEADAKLKKEKGDKLK 8466
Query: 204 KDEQVNVCLECISTSLRTLKRSFIRCSAQATITHLKKFVAKKVLNGIDQYREIDILCN 377
++Q N TS+ S ++C QA I + ++V+ ++ +++ CN
Sbjct: 8467 LEDQTNQSRIFEETSIEVT--SLLKCKQQAIIVSKSFALCERVVLNAEEPFTLEVFCN 8522
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 4.4
Identities = 29/118 (24%), Positives = 52/118 (44%)
Frame = +3
Query: 24 DRTMQDIVYKLVPDLQDNELKRERDFYRARGLPCPKDTALAADKPTGDEPEQPDNTDCHR 203
D+ Q+ KL D +D++LK+E D L KD L K D + + D +
Sbjct: 8435 DKLKQEADAKLKKD-KDDKLKQEAD----AKLKKDKDDKL---KQEADAKLKKEKGDKLK 8486
Query: 204 KDEQVNVCLECISTSLRTLKRSFIRCSAQATITHLKKFVAKKVLNGIDQYREIDILCN 377
++Q N TS+ S ++C QA I + ++V+ ++ +++ CN
Sbjct: 8487 LEDQTNQSRIFEETSIEVT--SLLKCKQQAIIVSKSFALCERVVLNAEEPFTLEVFCN 8542
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 4.4
Identities = 29/118 (24%), Positives = 52/118 (44%)
Frame = +3
Query: 24 DRTMQDIVYKLVPDLQDNELKRERDFYRARGLPCPKDTALAADKPTGDEPEQPDNTDCHR 203
D+ Q+ KL D +D++LK+E D L KD L K D + + D +
Sbjct: 8435 DKLKQEADAKLKKD-KDDKLKQEAD----AKLKKDKDDKL---KQEADAKLKKEKGDKLK 8486
Query: 204 KDEQVNVCLECISTSLRTLKRSFIRCSAQATITHLKKFVAKKVLNGIDQYREIDILCN 377
++Q N TS+ S ++C QA I + ++V+ ++ +++ CN
Sbjct: 8487 LEDQTNQSRIFEETSIEVT--SLLKCKQQAIIVSKSFALCERVVLNAEEPFTLEVFCN 8542
>Z81074-10|CAB03036.1| 278|Caenorhabditis elegans Hypothetical
protein F32B6.5 protein.
Length = 278
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 274 MKLLLSVRNDVDIHSKQTLTCSSFRWQSVLSGCSGSSPVGLSAARAVSLGQG 119
MK+ +V + DI ++L C++ QSV S S SS S++ + LG G
Sbjct: 188 MKIYGAVNHKFDISEDESLPCTA---QSVSSPISPSSTTSDSSSETIILGPG 236
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 418 YTNFRVWSLPSNSSLHNMSISLYWSIPFNT 329
Y NFR P N+ + + S W I FN+
Sbjct: 73 YLNFRTIVCPENAEISKLGNSFAWEIKFNS 102
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 418 YTNFRVWSLPSNSSLHNMSISLYWSIPFNT 329
Y NFR P N+ + + S W I FN+
Sbjct: 73 YLNFRTIVCPENAEISKLGNSFAWEIKFNS 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,412,611
Number of Sequences: 27780
Number of extensions: 380664
Number of successful extensions: 1038
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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