Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21e21
(571 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.11c |||nucleosome assembly protein Nap2 |Schizosaccharo... 29 0.48
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 27 1.9
SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces p... 27 1.9
SPBC1105.02c |lys4||homocitrate synthase |Schizosaccharomyces po... 27 2.6
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 27 2.6
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 2.6
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 26 4.5
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 26 4.5
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 26 4.5
SPAPB17E12.07c |sen2||tRNA-splicing endonuclease subunit Sen2|Sc... 26 4.5
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 25 5.9
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 25 5.9
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo... 25 5.9
SPBC1773.08c |||mannosyltransferase complex subunit |Schizosacch... 25 7.8
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 25 7.8
SPAC7D4.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 7.8
>SPBC2D10.11c |||nucleosome assembly protein Nap2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 379
Score = 29.1 bits (62), Expect = 0.48
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 402 YYLQIADEMANRIIELEAKVRTPDCEIIENEYRDNLADLRLLVAKEY 542
Y +A + NRI L+ + DC+ I+ E+R + DL K+Y
Sbjct: 83 YIESLAPAVQNRITALKGLQK--DCDAIQYEFRQKMLDLETKYEKKY 127
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 339 INMLHLPTTERFLRALILCCQYYLQIADEMANRIIELEAKVRTPDCEIIENEYRD 503
+NM ++FL +IL + + + D+M RI + + K + +IEN ++D
Sbjct: 126 VNMNVTLVQKQFLEMVILHLRNFESVTDKMNQRIDKFDGKFNS----VIENSFKD 176
>SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 161
Score = 27.1 bits (57), Expect = 1.9
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 384 LILCCQYYLQIADEMANRIIELEAKVRTPDCEII---EN-EYRDNLADLRLLVAKEY 542
LI CC ++ + AN I E EAK II EN E+++ +A+ L VA E+
Sbjct: 39 LIECCVEFIHLVSSEANEICEKEAKKTIAAEHIIKALENLEFKEYIAE-ALEVAAEH 94
>SPBC1105.02c |lys4||homocitrate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 2.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 369 RFLRALILC---CQYYLQIADEMANRIIELEAKVRTPDCEIIENEYRDNLADLRLLVAKE 539
R LR ++ C C ++ +AN LEA D I+ R+ + L L+A+
Sbjct: 211 RTLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIGERNGITPLGALLARM 270
Query: 540 YCT 548
Y T
Sbjct: 271 YVT 273
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 323 IKSSID*YASSSHDRKVFESTDSMLPV 403
IKS D Y SS+H+++V +TDSM V
Sbjct: 56 IKSPSD-YKSSAHEQRVNHTTDSMAHV 81
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 399 QYYLQIADEMANRIIELEAKVRTPDCEIIENEYRDNLADLRLLVAKE 539
Q +LQ+ DEM R++ L+ + + ++ EY+ N + +L A E
Sbjct: 633 QLHLQL-DEMTQRLVSLDEESKAVSQRKLDLEYKINNSKTQLATATE 678
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 123 LPPQPVETIQISTKAPTGAIE 185
+PP P T++I + APT A+E
Sbjct: 461 VPPPPESTVEIVSNAPTLAME 481
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 98 CIFIPFPMAVFIQTSKNTLFIISHRS 21
C+F+PF F T N L+I + S
Sbjct: 533 CVFVPFAFVTFSITGGNRLYIYAASS 558
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 204 LIEQIRFRRRYQRKLQPGQADVIT 275
L EQ+RFR YQ+ ++P + + T
Sbjct: 529 LYEQMRFRDHYQKHVEPSSSHLQT 552
>SPAPB17E12.07c |sen2||tRNA-splicing endonuclease subunit
Sen2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 159 TKAPTGAIEFRDDVDLIEQIRFRRRYQRK 245
TK G + F +D+ + E++ RRR+QRK
Sbjct: 93 TKRSLGLLGFDEDL-VAEEVTARRRFQRK 120
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 399 QYYLQIA-DEMANRIIELEAKVRTPDCEIIENEY 497
+Y +Q+ DE A R++ A++ PD E ++NEY
Sbjct: 208 RYLIQVGKDEEAVRVLSESAEL-FPDSEEVQNEY 240
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 24 AMADDEEGVFGGLYEDGHWEWNENTNTLHFISDLPPQP 137
A+ E GLY DGH++ N + D+ P+P
Sbjct: 567 ALVGGETSEMPGLYHDGHYDANGTSVGAVSRDDILPKP 604
>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 25.4 bits (53), Expect = 5.9
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -2
Query: 99 LYFHSIPNGRLHTNLQKHPLHHQPSQ 22
L+F +P RLH ++++ P+ P++
Sbjct: 256 LFFEGVPIKRLHIHVRRFPISEIPTE 281
>SPBC1773.08c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 391
Score = 25.0 bits (52), Expect = 7.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 300 LQYPLHPEEL*RLPDRVATSFGNACETVSVQLNLH 196
L Y L+ L R+ +R F N C+ V ++ LH
Sbjct: 6 LIYKLNHPPLRRIDERNDPLFSNGCKNVHLEAQLH 40
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.0 bits (52), Expect = 7.8
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 96 YFHSIPNGRLHTNLQKHPLH 37
Y H +P +H + HP+H
Sbjct: 365 YLHDLPESNIHDSGNFHPIH 384
>SPAC7D4.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 25.0 bits (52), Expect = 7.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 98 KYLTFYKRFTSTTSGNYSD 154
++L FY F S TS NY++
Sbjct: 66 RFLIFYNAFRSNTSWNYNE 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,435,694
Number of Sequences: 5004
Number of extensions: 49876
Number of successful extensions: 149
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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