Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21e21
         (571 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0397 - 17230152-17231453                                         31   0.85 
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284...    30   1.1  
10_08_0004 + 14022511-14022670,14022740-14023049,14023193-140234...    29   2.6  
02_05_1213 - 34963971-34964658,34965030-34965270,34965347-349657...    28   4.6  
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907     28   6.0  

>11_04_0397 - 17230152-17231453
          Length = 433

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
 Frame = -1

Query: 466 VRTFASNSIIRFAISSAICK*YWQHRISALKNLSVVGR*SILINTGLNIPTGAVNIAISF 287
           VR F +  ++   +  A C  +W HR         VG  +      L +  GAV++ +S+
Sbjct: 33  VRFFGTTIVLSLGLLHAACSLHWAHRPLP----RGVGTAAFGATAVLCLAVGAVSLLLSW 88

Query: 286 T--S*RVITSA*PGCNFLW*RLRNRIC-SIKSTSSRNSMAPVGAFV 158
           +  +    T A P    +  RL NR+C ++ ++S+   +APVG  V
Sbjct: 89  SAAARMTATKALP-TRRVERRLLNRLCAAVHASSALLMLAPVGLLV 133


>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
            27829243-27829449,27829611-27829704,27829806-27829870,
            27829946-27830398,27830467-27830760,27830837-27831295,
            27831367-27831588,27831755-27831968,27832039-27832494,
            27833280-27833389,27833468-27833644,27833758-27833979,
            27834048-27834167,27834274-27834383,27834552-27834607,
            27835252-27835440,27835602-27835775,27836066-27836281,
            27837066-27837106,27837971-27837986,27838330-27838415,
            27838737-27838910,27839093-27839149,27839720-27840064,
            27840175-27840216,27840377-27840496,27840575-27840724,
            27840830-27841534,27841609-27841954,27842978-27843080,
            27844817-27844860,27845905-27846101,27846322-27846344,
            27846802-27847122,27847406-27847579,27847843-27848047,
            27848817-27848880,27850097-27850278,27850291-27850350,
            27850688-27850748,27851249-27851313,27851491-27851569,
            27851656-27852021,27852442-27852790,27852887-27852989,
            27853103-27853373,27854296-27854405,27854515-27854652
          Length = 3364

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 306  TAPVGILSPVL--INMLHLPTTERFLRALILCCQYYLQIADEMANRI 440
            T+P+ ++ P    IN+  LP+  RF   +++C   YLQ   + + RI
Sbjct: 1887 TSPIKVILPTSCHINISFLPSYYRFTSVILVCIFRYLQSCQDSSARI 1933


>10_08_0004 +
           14022511-14022670,14022740-14023049,14023193-14023414,
           14023497-14023721,14024045-14024119,14024619-14024754,
           14025124-14025251,14025337-14025419,14025505-14025626,
           14025732-14025810,14026252-14026420,14026562-14026622,
           14026729-14026851,14027675-14027914,14028045-14028113,
           14028353-14028429,14028527-14028593
          Length = 781

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +3

Query: 42  EGVFGGLYEDGHWE---WNENTNTLHFISDLPPQPVETIQISTKAPTGAIE 185
           + V G LY D  +E   WN+    + ++++ PPQP      S     G+ E
Sbjct: 146 QSVHGSLYVDEWFEGISWNQEETLVAYVAEEPPQPKPEFNDSGYKKAGSSE 196


>02_05_1213 -
           34963971-34964658,34965030-34965270,34965347-34965736,
           34966515-34966781,34966881-34967249,34967931-34968014,
           34968113-34968226,34969952-34970018
          Length = 739

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +3

Query: 33  DDEEGVFGGLYEDGHWEWNENTNTLHFISDLPPQPVETIQISTKAPTGA 179
           DD  G        G W WN ++N   F  +  P PV T++ S+    GA
Sbjct: 642 DDYHGALALDSGSGSW-WNRSSNPSGFFDNRNPLPVITMEYSSGRIEGA 689


>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
          Length = 794

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +3

Query: 81  EWNENTNTLHFISDLPPQPVETIQISTKAP---TGAIEFRDDVDL 206
           +WN+     HFIS LPP  V  +  S   P    G + F++ +D+
Sbjct: 667 DWNKGGIKKHFISKLPPVLVIHLMRSLLGPHKVIGHVRFKEILDM 711


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,264,752
Number of Sequences: 37544
Number of extensions: 300948
Number of successful extensions: 787
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)