Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21e01
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 63 2e-10
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 60 2e-09
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 60 2e-09
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 56 2e-08
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 54 8e-08
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 48 9e-06
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 1.1
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 31 1.1
Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.4
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 29 2.4
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 29 2.4
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 29 2.4
AL031627-15|CAA20966.1| 318|Caenorhabditis elegans Hypothetical... 29 2.4
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 29 3.2
AF045646-8|AAK29830.1| 541|Caenorhabditis elegans Udp-glucurono... 29 3.2
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.3
U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z92817-5|CAE17970.2| 305|Caenorhabditis elegans Hypothetical pr... 28 7.5
U70853-2|AAM97995.1| 228|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF125442-5|AAD12795.1| 314|Caenorhabditis elegans Serpentine re... 28 7.5
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 116 bits (278), Expect = 2e-26
Identities = 72/191 (37%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Frame = +1
Query: 151 NDPRYITLLSLIVLAV-TLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLA-----YS 312
NDP + +L+ V+ + T++ + S + +N VL +GL D GKT +F +L+ Y
Sbjct: 7 NDPTTLAVLATAVIGLLTVLLLVLKSFASSNKNRVLFVGLMDCGKTTIFTQLSQKEAEYP 66
Query: 313 QYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAK--GIVFVIDSINI 486
+T+TSM EN +K +I+D PG +RLR K E H S IVFV+DS
Sbjct: 67 TTTKTYTSMVENKITLRIKDKEKEIIDYPGNDRLRQKLIENHLHSRSLLRIVFVVDSAAF 126
Query: 487 QKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSXVIKGLLEKEXNLVRVTK 666
K RDVAE YT+ + + + P+LI C+KQD LAK VI+ LEKE L+ ++
Sbjct: 127 SKNARDVAELFYTVALENV---DKVPILIACHKQDLSLAKTEKVIRNSLEKEIGLINKSR 183
Query: 667 SNQLQSVDXSE 699
+ L D SE
Sbjct: 184 AAALIGTDGSE 194
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/128 (28%), Positives = 72/128 (56%)
Frame = +1
Query: 253 LLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 432
L++GL +GKT + +L ++ T ++ N+E TL + D+ GQ+++R ++
Sbjct: 21 LMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIR-ALWK 79
Query: 433 QHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGS 612
+ + +VFV+DS +I++ I + E L+++L +P + + LL+ NKQD P A+
Sbjct: 80 YYFPNTTTLVFVVDSSDIER-IPEAKEELFSLLAEPELA--DSHLLVFANKQDMPNARSP 136
Query: 613 XVIKGLLE 636
+ LL+
Sbjct: 137 AELTQLLD 144
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/138 (27%), Positives = 75/138 (54%)
Frame = +1
Query: 190 LAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITS 369
L ++ +F +F +R +L++GL +GKT + +L + T ++ N+E
Sbjct: 3 LTISSLFNRLFGKRQV---RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59
Query: 370 NKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQ 549
N + + D+ GQ+++R + + + +G++FV+DS N ++ I + E L+ +L + ++
Sbjct: 60 NISFTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDKERIEESREELHKMLNEDELR 117
Query: 550 GNTTPLLILCNKQDQPLA 603
T LL+ NKQD P A
Sbjct: 118 DAT--LLVFANKQDLPNA 133
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/138 (27%), Positives = 75/138 (54%)
Frame = +1
Query: 190 LAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITS 369
L ++ +F +F +R +L++GL +GKT + +L + T ++ N+E
Sbjct: 3 LTISSLFNRLFGKRQV---RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59
Query: 370 NKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQ 549
N + + D+ GQ+++R + + + +G++FV+DS N ++ I + E L+ +L + ++
Sbjct: 60 NISFTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDKERIEESREELHKMLNEDELR 117
Query: 550 GNTTPLLILCNKQDQPLA 603
T LL+ NKQD P A
Sbjct: 118 DAT--LLVFANKQDLPNA 133
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/118 (27%), Positives = 64/118 (54%)
Frame = +1
Query: 250 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 429
+L++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLW 78
Query: 430 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLA 603
+ + +G++FV+DS N ++ + + E L +L + ++ LL+ NKQD P A
Sbjct: 79 RHYFQNTQGLIFVVDS-NDRERVGEAREELMRMLAEDELR--DAVLLVFANKQDLPQA 133
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 54.4 bits (125), Expect = 8e-08
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +1
Query: 196 VTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEYITSN 372
V + WI S + + L+GL +SGKT +A Q+ + ++ N+ + N
Sbjct: 5 VNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGN 64
Query: 373 KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQG 552
T+K+ D+ GQ R R+ +E++ IVF++D+ + ++++ L +L P Q
Sbjct: 65 VTIKLWDIGGQPRFRS-MWERYCRGVNAIVFMVDAAD-EEKLEASRNELMQLLDKP--QL 120
Query: 553 NTTPLLILCNKQDQP 597
+ P+L+L NK+D P
Sbjct: 121 DAIPVLVLGNKKDLP 135
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 54.4 bits (125), Expect = 8e-08
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +1
Query: 196 VTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEYITSN 372
V + WI S + + L+GL +SGKT +A Q+ + ++ N+ + N
Sbjct: 5 VNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGN 64
Query: 373 KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQG 552
T+K+ D+ GQ R R+ +E++ IVF++D+ + ++++ L +L P Q
Sbjct: 65 VTIKLWDIGGQPRFRS-MWERYCRGVNAIVFMVDAAD-EEKLEASRNELMQLLDKP--QL 120
Query: 553 NTTPLLILCNKQDQP 597
+ P+L+L NK+D P
Sbjct: 121 DAIPVLVLGNKKDLP 135
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 51.6 bits (118), Expect = 5e-07
Identities = 32/114 (28%), Positives = 61/114 (53%)
Frame = +1
Query: 250 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 429
+L++GL +GKT + RL + T ++ N+E+ N ++ DL GQ +R ++
Sbjct: 19 ILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIR-PYW 77
Query: 430 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 591
+ ++ I++V+DS + + + + L T+L + +QG L +L NKQD
Sbjct: 78 RCYYANTDAIIYVVDSAD-RDRVGISRQELATMLQEDELQG--AVLAVLANKQD 128
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 50.8 bits (116), Expect = 9e-07
Identities = 38/138 (27%), Positives = 67/138 (48%)
Frame = +1
Query: 184 IVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYI 363
+++A WWI ++Y ++++GL ++GKT + +T ++ N+EE
Sbjct: 3 LIMAKLFQSWWI-GKKY----KIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVS 57
Query: 364 TSNKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPI 543
N I D+ GQE LR K + + ++ VIDS + + I + E L+ +L
Sbjct: 58 YRNLDFVIWDIGGQESLR-KSWSTYYVQTDVVIVVIDSSDTTR-IPIMKEQLHNMLQHED 115
Query: 544 IQGNTTPLLILCNKQDQP 597
+ +L+L NKQD P
Sbjct: 116 LA--RAHILVLANKQDLP 131
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/119 (25%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +1
Query: 247 SVLLMGLSDSGKTLLFVRLAYSQYR--QTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 420
+++++GL +SGKT + +L + R Q ++ + + T N + D+ GQ + R+
Sbjct: 19 NIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRS 78
Query: 421 KFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQP 597
+ E + S++G++FV+DS + + + + + L ++ + P++IL NK D P
Sbjct: 79 TW-ESYFHSSQGVIFVLDSSD-RLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIP 135
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 47.6 bits (108), Expect = 9e-06
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Frame = +1
Query: 238 LRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFT---SMKENIEEYITSNKTLKIVDLPGQE 408
+ + V+L+GL +GKT + RL Q ++ NIE N L D+ G
Sbjct: 368 IESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLP 427
Query: 409 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 588
+LR+ ++ + S+A+ I +VID +++ + E L ++ DP++ T P+++ N++
Sbjct: 428 KLRH-LWKHYYSNAQAIFYVIDGYAVERFSEAIKE-LNRVMSDPLV--GTCPVIVAVNRK 483
Query: 589 D 591
D
Sbjct: 484 D 484
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/114 (23%), Positives = 58/114 (50%)
Frame = +1
Query: 250 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 429
+L++GL +GKT + +L Q T ++ N+E N + D+ GQ+++R +
Sbjct: 16 ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQDKIR-PLW 74
Query: 430 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 591
+ + + ++FV+D+ + + + + L+ I+ D + +L+ NKQD
Sbjct: 75 RHYYTGTQALIFVMDAAD-RDRVDEARMELHRIINDR--EMKEAIILVFANKQD 125
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Frame = +1
Query: 250 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYIT-SNKTLKIVDLPGQERLRNKF 426
+LL+GL ++GKT + +L+ + + N++ + L + D+ GQ +R +
Sbjct: 20 ILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSIR-PY 78
Query: 427 FEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAK 606
+ + + ++FVIDS N +K ++ L +L + ++ P+LI NKQD A
Sbjct: 79 WSNYYENIDTLIFVIDS-NDKKRFDEMNIELGELLDEEKLR--KVPVLIFANKQDLVTAA 135
Query: 607 GSXVI 621
S I
Sbjct: 136 SSEEI 140
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/116 (25%), Positives = 61/116 (52%)
Frame = +1
Query: 250 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 429
+L++GL ++GKT L + ++ +I+ + L + D+ GQ+ LR+ ++
Sbjct: 19 ILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRS-YW 77
Query: 430 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQP 597
+ + S +++V+DS + ++ + +E L +L + + G LL+L NK D P
Sbjct: 78 KNYFESTDALIWVVDSSD-RERLLQCSEELKKLLGEERLAG--ASLLVLANKSDLP 130
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/128 (24%), Positives = 62/128 (48%)
Frame = +1
Query: 241 RNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 420
+ ++ +GL ++GKT L L + Q ++ E+ + DL G + R
Sbjct: 21 KGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQAR- 79
Query: 421 KFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPL 600
+ ++ + + +VF+ID + ++ +++ L ++L D I + P+LIL NK D+P
Sbjct: 80 RVWKDYFPAVDAVVFLIDVADAER-MQESRVELESLLQDEQIA--SVPVLILGNKIDKPG 136
Query: 601 AKGSXVIK 624
A +K
Sbjct: 137 ALSEDQLK 144
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 35.9 bits (79), Expect = 0.028
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +1
Query: 250 VLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEY--ITSNKTLKIV--DLPGQERL 414
V+++G + GKT L R ++ + T ++ + E + N+ L++ D GQER
Sbjct: 103 VIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERY 162
Query: 415 RNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 591
R + + +VFV D + ++ D+A ++ ++ + P +++ NK D
Sbjct: 163 RQSIVAHYYRNVNAVVFVYD-VTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCD 220
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 30.7 bits (66), Expect = 1.1
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +1
Query: 250 VLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEY---ITSNKTLKIVDLPGQERLR 417
V +MG D GKT L + SQ F + ++I + +T + + +D PG
Sbjct: 159 VTIMGHVDHGKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAA-- 216
Query: 418 NKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQP 597
F AKG V+ + +++ D +Q L++ NK D+P
Sbjct: 217 --FASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFAKDANVQ-----LVVAVNKIDKP 269
Query: 598 LAKGSXVIKGLLEKE 642
A ++ LLE +
Sbjct: 270 NADPMRAMRSLLEHD 284
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 540 DHSGKHNSPSNIVQQTGPAISKRKPSYQRITRKRXKFSSCDQIESTA 680
D + + SP QQ P++ +RK +R R+R SS ++ STA
Sbjct: 303 DRTVRRRSPERRRQQRSPSVERRKSPQRRDERRRRHDSSENERRSTA 349
>Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical
protein T13F3.1 protein.
Length = 346
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 141 FCMNLFFNHFRFHCRVLSLHTH*VTKLICTL 49
FCM +F HF + + HT + KL+C L
Sbjct: 104 FCMGIFGIHFFYRYLAIYGHTEMIRKLVCIL 134
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.4
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
Frame = +1
Query: 241 RNSVLLMGLSDSGKT----LLFVR-LAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQ 405
+ VLLMG S SGKT ++F +A R T E+ N L + D GQ
Sbjct: 4 KRKVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVLHLWDCGGQ 63
Query: 406 ERLRNKFFEQHKSSA-KGI-----VFVIDSINIQKEIRDVAEYLYTIL 531
E F K K + VF ++S +K++R L +L
Sbjct: 64 ESFMENFLVSQKDQIFKNVQVLIYVFDVESREFEKDLRYYQSCLEALL 111
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 88 RKNSTMESEVVKEKIHTEPILNDPRYITLLSLIV-LAVTLIF--WWIFSRRYTLRNSVLL 258
R NST E + +E+IH +P + T+ +I+ AV +F W F+ Y S+
Sbjct: 282 RLNSTPEDDEEEEEIHQDPPVLSTLIATVAWIILSAAVFCLFEDWTFFTSFYFCFISLTT 341
Query: 259 MGLSD 273
+GL D
Sbjct: 342 IGLGD 346
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 88 RKNSTMESEVVKEKIHTEPILNDPRYITLLSLIV-LAVTLIF--WWIFSRRYTLRNSVLL 258
R NST E + +E+IH +P + T+ +I+ AV +F W F+ Y S+
Sbjct: 282 RLNSTPEDDEEEEEIHQDPPVLSTLIATVAWIILSAAVFCLFEDWTFFTSFYFCFISLTT 341
Query: 259 MGLSD 273
+GL D
Sbjct: 342 IGLGD 346
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 88 RKNSTMESEVVKEKIHTEPILNDPRYITLLSLIV-LAVTLIF--WWIFSRRYTLRNSVLL 258
R NST E + +E+IH +P + T+ +I+ AV +F W F+ Y S+
Sbjct: 282 RLNSTPEDDEEEEEIHQDPPVLSTLIATVAWIILSAAVFCLFEDWTFFTSFYFCFISLTT 341
Query: 259 MGLSD 273
+GL D
Sbjct: 342 IGLGD 346
>AL031627-15|CAA20966.1| 318|Caenorhabditis elegans Hypothetical
protein Y102A5C.25 protein.
Length = 318
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/74 (21%), Positives = 39/74 (52%)
Frame = -1
Query: 525 CV*VFCYISDFFLYIDRINHKHNSLSTTLVLFKEFISQSLLSRQINYFQCFIRSYILFNI 346
C+ ++ + F++Y +++NH+ + ++++ I+ I Y+ FI + F +
Sbjct: 33 CIIIYTVVLPFYIYANKVNHERDK---EILIYP--ITNHFYKMVIVYYLIFIST--CFGV 85
Query: 345 FFHRSKSLSVLRVS 304
FF+ S S++ +S
Sbjct: 86 FFYPYLSDSIVLIS 99
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +1
Query: 391 DLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLL 570
D GQER R + + +VFV D + ++ D+A ++ ++ + P +
Sbjct: 2 DTAGQERYRQSIVAHYYRNVNAVVFVYD-VTCRESFNDLALWIKECEKHGLVGDSEVPRI 60
Query: 571 ILCNK 585
++ NK
Sbjct: 61 LIGNK 65
>AF045646-8|AAK29830.1| 541|Caenorhabditis elegans
Udp-glucuronosyltransferase protein52 protein.
Length = 541
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 545 MIGSHKIVYRYSATSLISFCILIESITNTI 456
+IG + V+ Y +ISFCIL+ SI ++
Sbjct: 487 LIGQNMSVFEYYCLDIISFCILLLSIVISV 516
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 PRYITLLSLIVLAVTLI---FWWIFSRRYTLRNSVLLMGLSDSGKTLLFV 297
P Y ++ I +AV + FWW +R+Y+L + L + L+DS LF+
Sbjct: 72 PLYYLSVAAITIAVHVCLREFWWDVNRKYSLGS--LFLYLADSTSINLFI 119
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 PRYITLLSLIVLAVTLI---FWWIFSRRYTLRNSVLLMGLSDSGKTLLFV 297
P Y ++ I +AV + FWW +R+Y+L + L + L+DS LF+
Sbjct: 72 PLYYLSVAAITIAVHVCLREFWWDVNRKYSLGS--LFLYLADSTSINLFI 119
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 491 FCILIESITNTIPLALLLCCSKNLFL 414
FC+ ++S+T+ + LL C SKN+++
Sbjct: 38 FCVHMQSVTSGLSEELLFCKSKNVYI 63
>U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical
protein F36D4.4 protein.
Length = 472
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 304 AYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 420
++SQ ++F + + N+ E N T +I P + LRN
Sbjct: 356 SFSQMNKSFANTRSNVREDENGNNTAEIEVTPNEPLLRN 394
>Z92817-5|CAE17970.2| 305|Caenorhabditis elegans Hypothetical
protein W08G11.5 protein.
Length = 305
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -2
Query: 491 FCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFIEVKV 324
FC ++ S+TN++ + L+L S S T F E+ Y+S+ F+E K+
Sbjct: 12 FCAIVSSLTNSVLIFLILTKSPPQLGSYKWLMLCTCF---FELAYASLDIFVEPKI 64
>U70853-2|AAM97995.1| 228|Caenorhabditis elegans Hypothetical
protein M01H9.5 protein.
Length = 228
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/59 (18%), Positives = 29/59 (49%)
Frame = -2
Query: 527 IVYRYSATSLISFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSS 351
++ R+ T ++SFC ++ + + + L C + ++ GR+ L +++ +S
Sbjct: 59 LIRRFLHTFVLSFCTKLQVVMRRLLIVLTTCAFTDAIGTMLVQGRADTIRTLRDIVRNS 117
>AF125442-5|AAD12795.1| 314|Caenorhabditis elegans Serpentine
receptor, class v protein22 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = -3
Query: 427 RIYFSVSLVQADQLFSMFY*KLYTLQYFLS*K*KSVCIESKRVLQTAKSCQSLIGPLTIL 248
R+ VSL A QL SM Y L++ F + + +R L A S IGP TIL
Sbjct: 233 RLACQVSLSFAAQLISMIY--LFSSFIFAETGNTAQIVNLRRFLPLAYGTISFIGPFTIL 290
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 453 LSTTLVLFKEFISQSLLS-RQINYFQCFIRSYILFNIFF 340
L T+V+F + SLLS R+ N + C S +F+IFF
Sbjct: 382 LLQTIVIFPNYSKTSLLSFRECNLY-CQTTSLTIFSIFF 419
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,569,664
Number of Sequences: 27780
Number of extensions: 299419
Number of successful extensions: 965
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -