Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21d22
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040653-4|ABS83854.1|  339|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z83106-3|CAB05495.2|  339|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81463-11|CAC70074.2|  376|Caenorhabditis elegans Hypothetical p...    28   3.9  
Z81463-10|CAB03854.4|  352|Caenorhabditis elegans Hypothetical p...    28   3.9  
Z81129-8|CAC70106.2|  376|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z81129-7|CAB03409.4|  352|Caenorhabditis elegans Hypothetical pr...    28   3.9  

>AF040653-4|ABS83854.1|  339|Caenorhabditis elegans Hypothetical
           protein K05F6.12 protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 243 FIGSIIHTCYFAQNGRFDVTEKSLKDFVTQKIKRNEFLSVLNVTIVNNLLTTMVD 407
           F G ++H+C    +G F + EK +K  V      N  + +LN   +N+L   + D
Sbjct: 83  FQGVLLHSCSHT-DGEFCIDEKEIKWRVDPSSWFNNLMYILNPPKINHLYFQLAD 136


>Z83106-3|CAB05495.2|  339|Caenorhabditis elegans Hypothetical
           protein F22B8.4 protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 218 SDILIRVGNIKNHYFNTYTLYNVL**YWVLQN 123
           SDI+      KNH FN   +YN++   W  QN
Sbjct: 76  SDIMFLSATSKNHLFNFNEMYNIVHRNWPNQN 107


>Z81463-11|CAC70074.2|  376|Caenorhabditis elegans Hypothetical
           protein C06B8.2b protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 218 SDILIRVGNIKNHYFNTYTLYNVL**YWVLQN 123
           SDI+      KNH FN   +YN++   W  QN
Sbjct: 124 SDIMFVSATSKNHLFNFNEMYNIVHRNWPNQN 155


>Z81463-10|CAB03854.4|  352|Caenorhabditis elegans Hypothetical
           protein C06B8.2a protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 218 SDILIRVGNIKNHYFNTYTLYNVL**YWVLQN 123
           SDI+      KNH FN   +YN++   W  QN
Sbjct: 124 SDIMFVSATSKNHLFNFNEMYNIVHRNWPNQN 155


>Z81129-8|CAC70106.2|  376|Caenorhabditis elegans Hypothetical
           protein C06B8.2b protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 218 SDILIRVGNIKNHYFNTYTLYNVL**YWVLQN 123
           SDI+      KNH FN   +YN++   W  QN
Sbjct: 124 SDIMFVSATSKNHLFNFNEMYNIVHRNWPNQN 155


>Z81129-7|CAB03409.4|  352|Caenorhabditis elegans Hypothetical
           protein C06B8.2a protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 218 SDILIRVGNIKNHYFNTYTLYNVL**YWVLQN 123
           SDI+      KNH FN   +YN++   W  QN
Sbjct: 124 SDIMFVSATSKNHLFNFNEMYNIVHRNWPNQN 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,325,212
Number of Sequences: 27780
Number of extensions: 226951
Number of successful extensions: 443
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)