Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21d18
(607 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1119 + 8882481-8882687,8882793-8882933,8883024-8883143,888... 54 1e-07
01_06_1132 - 34769800-34769955,34770098-34770157,34770259-347703... 47 1e-05
05_06_0039 + 25113409-25113522,25113827-25113915,25114013-251141... 46 2e-05
03_05_0603 - 26046145-26046273,26046400-26046459,26046820-260468... 45 4e-05
01_06_0843 - 32374830-32374958,32375407-32375482,32375572-323756... 43 2e-04
05_05_0268 + 23720837-23720914,23722398-23722486,23722669-237228... 41 9e-04
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 30 1.6
03_05_0773 + 27612237-27612330,27612426-27612523,27612605-276127... 29 2.9
02_03_0201 + 16302797-16302799,16303949-16304084,16304163-163042... 29 2.9
01_06_1483 + 37683559-37683922,37684916-37685193,37685865-37686167 29 3.8
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 28 5.0
12_02_1149 - 26467252-26468319,26468452-26469147,26469263-264694... 28 6.6
05_03_0395 + 13473159-13473929 28 6.6
03_06_0502 - 34384285-34384503,34384595-34384755,34384854-343849... 28 6.6
07_03_1007 + 23268771-23269021,23269098-23269128 27 8.7
03_05_0503 - 24952770-24953846,24953961-24954641,24954730-249548... 27 8.7
03_02_0087 + 5553730-5553842,5555221-5555353,5555887-5556023,555... 27 8.7
02_05_0704 - 31064996-31065214,31065306-31065466,31065583-310656... 27 8.7
>01_01_1119 +
8882481-8882687,8882793-8882933,8883024-8883143,
8883789-8883884,8884076-8884189
Length = 225
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 2/159 (1%)
Frame = +3
Query: 135 LISFVTWSWLYLWFARDG--NKSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMK 308
++S V + W AR +S ++C+RAV+ H + A + + L
Sbjct: 5 VVSGVAFWWTAFLLARGAFPKRSYDFCNRAVSAAHAAAAVSLACLSVADWSRPLSPLAAA 64
Query: 309 TTPWHYALMLWSWGYFAFDLLWCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACT 488
++P + + Y +D C++ VHH ++V + G +
Sbjct: 65 SSPPQMKALAVTLSYMVYDAACCYLNDDVRVDNTVHHLVSIVGIAAGLAYRRCGTEMVAS 124
Query: 489 LAFLEVTNPLLQLRWFLKSNGYAKTVLYXMVEVTYLVTF 605
L E+++PLL LR LK G T L +V++ + V F
Sbjct: 125 LFVTEISSPLLHLREILKEFGIKDTDLNLLVDILFAVIF 163
>01_06_1132 -
34769800-34769955,34770098-34770157,34770259-34770334,
34770412-34770533,34770634-34770708,34770899-34771025,
34771126-34771214,34773479-34773535,34773584-34773661
Length = 279
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 4/131 (3%)
Frame = +3
Query: 192 KSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMKTTPWHYALMLW-SWGYFAFDL 368
K EW +R + H VA VV Y + + + W M S GYF DL
Sbjct: 68 KKVEWNNRGFSTFHALVAAVVSFYLVVISDLFHSNIIIDRNSWLSDAMFGVSIGYFLTDL 127
Query: 369 ---LWCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFL 539
LW F G +L HH ++ A+ + L F E T P + LRW+L
Sbjct: 128 VMILWYFPSLGGKEYLL-HHGLSMYAICLALLSGKAHMYILMVL-FTEATTPFVNLRWYL 185
Query: 540 KSNGYAKTVLY 572
+ G LY
Sbjct: 186 EVAGKKTHNLY 196
>05_06_0039 +
25113409-25113522,25113827-25113915,25114013-25114148,
25114231-25114305,25114456-25114577,25114680-25114755,
25115242-25115301,25115383-25115511
Length = 266
Score = 46.0 bits (104), Expect = 2e-05
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Frame = +3
Query: 201 EWCSRAVTLLHGSVATVVGLYQCGAEAITPCR----LTMKTTPWHYALMLWSWGYFAFDL 368
EW +R ++ +H T++ Y + + +T +++ + S GYF DL
Sbjct: 64 EWNNRGMSTVHAIFITLMSAYLVFFSGLFSDQQDGPVTFRSSSLSNFTLGVSVGYFIADL 123
Query: 369 ---LWCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFL 539
LW + G LVHH +L AVT YT G + E T P + LRWFL
Sbjct: 124 AMILWFYPSLGGMEY-LVHHVLSLTAVT-YTMLSGEGQLYTYMSLISETTTPGINLRWFL 181
Query: 540 KSNGYAKTVLYXMVEVTYLVTF 605
G ++ Y + V +T+
Sbjct: 182 DVAGMKRSKRYVVNGVAMFLTW 203
>03_05_0603 -
26046145-26046273,26046400-26046459,26046820-26046895,
26046988-26047109,26047286-26047360,26047466-26047536,
26048102-26048129,26048625-26048738
Length = 224
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 342 SWGYFAFDLLWCFVYWGDHYLM--LVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNP 515
S GYF DL F + M +VHHT +LVA+ YT G + + E T P
Sbjct: 73 SVGYFIADLAMIFWLYPSLGGMEYIVHHTLSLVAIA-YTMLSGEGQFYTYMVLISETTTP 131
Query: 516 LLQLRWFLKSNGYAKTVLYXMVEVTYLVTF 605
+ LRWFL + G K+ Y + + V +
Sbjct: 132 EINLRWFLDTAGLKKSSAYLVNGILMFVAW 161
>01_06_0843 -
32374830-32374958,32375407-32375482,32375572-32375693,
32375834-32375908,32376007-32376142,32376223-32376311,
32377304-32377466,32379772-32379860,32379983-32380061,
32380195-32380240,32380718-32380801,32380919-32380982,
32381103-32381156,32381279-32381347,32381470-32381778
Length = 527
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Frame = +3
Query: 201 EWCSRAVTLLHGSVATVVGLYQCGAEAITPCRL----TMKTTPWHYALMLWSWGYFAFDL 368
EW +R ++ +H T++ +Y + L T++++ + S GYF DL
Sbjct: 345 EWNNRGMSTVHAMFITLMSVYLVFFSNLFSDELDGPVTVRSSNLSNFTLGVSLGYFIADL 404
Query: 369 L---WCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFL 539
W + G +L HH +++++ VY G + + E T P + LRWFL
Sbjct: 405 AMLSWAYPSLGGMEYVL-HHLLSIISL-VYAIYSEEGQLYTYMVLISETTTPGINLRWFL 462
Query: 540 KSNGYAKTVLYXMVEVTYLVTF 605
+ G ++ Y + VT V +
Sbjct: 463 DTVGMKRSKAYLVNGVTMFVAW 484
>05_05_0268 +
23720837-23720914,23722398-23722486,23722669-23722807,
23722899-23722973,23723069-23723190,23723287-23723362,
23723786-23723845,23723939-23724091
Length = 263
Score = 40.7 bits (91), Expect = 9e-04
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 8/132 (6%)
Frame = +3
Query: 201 EWCSRAVTLLHGSVATVVGLYQCGAEAI----TPCRLTMKTTPWHYALMLW-SWGYFAFD 365
EW +R + H VA VV Y + + + W M S GYF D
Sbjct: 52 EWNNRGFSTFHALVAAVVSFYLLVISDLFSKDVHGAIIIDRKSWMSDAMFGVSLGYFLTD 111
Query: 366 LL---WCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWF 536
LL W F G +L HH ++ A+++ G + + E T P + LRW+
Sbjct: 112 LLMILWHFPSLGGKEYLL-HHGLSMYAISLALLSG-KGHVYILMVLITEATTPFVNLRWY 169
Query: 537 LKSNGYAKTVLY 572
L G + LY
Sbjct: 170 LDLAGRKDSKLY 181
>01_06_1818 - 40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 187 VTKAQSGAQGQ*PSCTEAL-LQSSVYINAEQK 279
VTKA SG Q P C A QS VY N E+K
Sbjct: 992 VTKAASGMDWQRPLCKTAYWFQSRVYTNMEEK 1023
>03_05_0773 +
27612237-27612330,27612426-27612523,27612605-27612781,
27612869-27612969,27613079-27613154,27613255-27613314,
27613412-27613596,27613669-27613807,27614229-27614315,
27614939-27615127,27615243-27615461
Length = 474
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 339 WSWGYFAFDLLWCFVYWGDHYLMLVHHTSALVAVTVY 449
+ WGY F CFV ++ L+ T L+AVT Y
Sbjct: 285 FQWGYPIFFADDCFVMIAASFVSLIESTGTLMAVTRY 321
>02_03_0201 +
16302797-16302799,16303949-16304084,16304163-16304250,
16305531-16305683,16306647-16306809,16306906-16307090,
16307164-16307337,16308055-16308200,16308369-16308492,
16308608-16308788,16309302-16309371,16310155-16310196,
16310276-16310394,16310474-16310672,16311442-16311573,
16312435-16312538,16312641-16312820,16314000-16314090,
16314100-16314139,16314225-16314364,16314500-16314660,
16314897-16315020,16315104-16315255
Length = 968
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 99 LGPELSTASLLKLISFVTWSWLYLWFAR---DGNKSPEWCSRAVTLLHGSV 242
+ P + A L+KLI + WS +YL + D N W S + LL V
Sbjct: 159 VNPPIEVADLIKLICKIFWSSIYLEIPKQLFDPNVFNAWMSLFINLLERPV 209
>01_06_1483 + 37683559-37683922,37684916-37685193,37685865-37686167
Length = 314
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 324 YALMLWSWGYFAF---DLLWCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLA 494
Y+ + +S GYFA+ D+L +Y G +L+HH L+ T+ ++ T TL
Sbjct: 153 YSALCFSCGYFAYDQLDMLRYRLYSGRIPGILMHHLILLICFTLALYRNVTINYLILTLV 212
Query: 495 FLEVTNPLLQLRWFLKSNGY 554
E+ + L +R + G+
Sbjct: 213 -CELHSVFLHIRKLRRMAGF 231
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 225 LLHGSVATVVGLYQCGAEAITPCRLTMKTTP-WHYALMLWSWGYFAFDLLWCF--VYWGD 395
++HGS T VG GA+ C+ T K+ W + ++ F D++ C +Y G
Sbjct: 114 VIHGSRFTGVGAQILGADDKYICQFTEKSNNFWGIQVHIFLGVLFVLDVV-CIPCIYKGR 172
Query: 396 HYLML 410
H LML
Sbjct: 173 HELML 177
>12_02_1149 -
26467252-26468319,26468452-26469147,26469263-26469409,
26470936-26471274
Length = 749
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 381 VYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAF 497
V W DH+ +L A + ++ Y GC+ A L F
Sbjct: 574 VSWNDHFFVLKVEAGAYYIIDTLGERLYEGCSQAYILKF 612
>05_03_0395 + 13473159-13473929
Length = 256
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 339 WSWGYFAFDLLWCFVYWGDHYLMLVHHTSAL-VAVTVYTQKDYTGCTFACTLAFLEVTNP 515
+S YF DLL + L + HH + L V VT + L EVT+
Sbjct: 93 YSVAYFTMDLLHYLAFLPGDTLFIAHHVATLFVFVTCRYLVRHGAYALLVLLVLAEVTS- 151
Query: 516 LLQLRWFL 539
LLQ W L
Sbjct: 152 LLQNVWTL 159
>03_06_0502 -
34384285-34384503,34384595-34384755,34384854-34384931,
34385444-34385595,34385645-34385703,34385808-34385894,
34385990-34386086,34386232-34386416,34386494-34386553,
34386640-34386715,34386824-34386924,34387039-34387215,
34387302-34387399,34387505-34387604
Length = 549
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Frame = +3
Query: 210 SRAVTLLHGSVATVVGLYQCGAEAIT-PCRLTMKT----TPWHYALMLWSWGYFAFDLLW 374
S A+ L+ TV G Y+ A CR PW + WG FD
Sbjct: 225 SVALVWLYAFFLTVGGAYKNAAPKTQFHCRTDRSGLVGGAPWISVPYPFQWGAPTFDAGE 284
Query: 375 CFVYWGDHYLMLVHHTSALVAVTVY 449
F ++ LV T A +AV+ Y
Sbjct: 285 AFAMMAASFVALVESTGAFIAVSRY 309
>07_03_1007 + 23268771-23269021,23269098-23269128
Length = 93
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +2
Query: 443 CIHTKRLYRLHVCLHAGVFRSHQSPTATTMVFKKQWLCQNRS 568
C+ + R+ C++A + ++ T+ K+QW C R+
Sbjct: 17 CMQSMSTCRVVACMNAQQIQQNKMNVTTSSSSKRQWRCDGRT 58
>03_05_0503 -
24952770-24953846,24953961-24954641,24954730-24954882,
24955041-24955043
Length = 637
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 381 VYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAF 497
V W DH+ +L A + ++ Y GC A L F
Sbjct: 463 VSWNDHFFLLKVERDAYYIIDTLGERLYEGCNQAYILKF 501
>03_02_0087 +
5553730-5553842,5555221-5555353,5555887-5556023,
5556254-5556311,5556403-5556642
Length = 226
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 307 RQRRGITL*CYGPGVTSHSTFCGASCTGAITI 402
R RR + L G G+T+ TF A + IT+
Sbjct: 69 RNRRAVCLFAIGDGITAALTFSAACASSGITV 100
>02_05_0704 -
31064996-31065214,31065306-31065466,31065583-31065660,
31066560-31066651,31066775-31066833,31066924-31067010,
31067118-31067214,31067311-31067495,31067593-31067665,
31067725-31067805,31067948-31068048,31068133-31068246,
31068391-31068488,31069789-31069915
Length = 523
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 315 PWHYALMLWSWGYFAFDLLWCFVYWGDHYLMLVHHTSALVAVTVY 449
PW + WG FD F ++ LV T A +AV+ Y
Sbjct: 259 PWIRVPYPFQWGAPTFDAGEAFAMMAASFVALVESTGAFIAVSRY 303
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,410,062
Number of Sequences: 37544
Number of extensions: 328912
Number of successful extensions: 869
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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