Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21d18
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128040-1|BAC87244.1| 245|Homo sapiens protein ( Homo sapiens ... 82 1e-15
BC139737-1|AAI39738.1| 263|Homo sapiens transmembrane protein 5... 39 0.012
AK056404-1|BAB71177.1| 263|Homo sapiens protein ( Homo sapiens ... 39 0.012
BC015232-1|AAH15232.2| 148|Homo sapiens transmembrane protein 1... 37 0.063
AY358726-1|AAQ89088.1| 246|Homo sapiens GPQH2552 protein. 31 3.1
AK129846-1|BAC85241.1| 236|Homo sapiens protein ( Homo sapiens ... 30 5.5
BC075855-1|AAH75855.1| 585|Homo sapiens suppression of tumorige... 29 9.6
BC030954-1|AAH30954.1| 547|Homo sapiens ST7 protein protein. 29 9.6
AF234886-1|AAF85949.1| 50|Homo sapiens FAM4A1 protein. 29 9.6
AF234883-1|AAF85946.1| 585|Homo sapiens FAM4A1 splice variant b... 29 9.6
AF234882-1|AAF85945.1| 554|Homo sapiens FAM4A1 splice variant a... 29 9.6
AC106873-1|AAS07529.1| 50|Homo sapiens unknown protein. 29 9.6
>AK128040-1|BAC87244.1| 245|Homo sapiens protein ( Homo sapiens
cDNA FLJ46159 fis, clone TESTI4002072. ).
Length = 245
Score = 82.2 bits (194), Expect = 1e-15
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Frame = +3
Query: 135 LISFVTWSWLYLWFAR-DGNKSPEWCSRAVTLLHGSVATVVGLYQCGAEAITP-CRLTMK 308
L S W LY+ F + ++S EW R VT HG ++ + Y + P
Sbjct: 10 LCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSP 69
Query: 309 TTPWHYALMLWSWGYFAFDLLWCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACT 488
TP ++ + GYF FDL WC + + L+L HHT +++ + + +G
Sbjct: 70 NTPLQVHVLCLTLGYFIFDLGWCVYFQSEGALILAHHTLSILGIIMALVLGESGTEVNAV 129
Query: 489 LAFLEVTNPLLQLRWFLKSNGYAKTVLYXMVEVTYLVTF 605
L E+TNPLLQ+RWFL+ G+ + +V+ ++ F
Sbjct: 130 LFGSELTNPLLQMRWFLRETGHYHSFTGDVVDFLFVALF 168
>BC139737-1|AAI39738.1| 263|Homo sapiens transmembrane protein 56
protein.
Length = 263
Score = 39.1 bits (87), Expect = 0.012
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Frame = +3
Query: 192 KSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMKTTPWHYALMLWSWGYFAFDLL 371
K EW SR V+ H V + GLY + T + + GY DL
Sbjct: 45 KKIEWNSRVVSTCHSLVVGIFGLYIFLFDEATKADPLWGGPSLANVNIAIASGYLISDLS 104
Query: 372 WCFVYW---GDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFLK 542
+YW GD + ++HH ++L A + + L E+++P + RWF +
Sbjct: 105 IIILYWKVIGDKF-FIMHHCASLYAYYLVLKNGVLAYIGNFRL-LAELSSPFVNQRWFFE 162
Query: 543 SNGYAK 560
+ Y K
Sbjct: 163 ALKYPK 168
>AK056404-1|BAB71177.1| 263|Homo sapiens protein ( Homo sapiens
cDNA FLJ31842 fis, clone NT2RP7000259. ).
Length = 263
Score = 39.1 bits (87), Expect = 0.012
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Frame = +3
Query: 192 KSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMKTTPWHYALMLWSWGYFAFDLL 371
K EW SR V+ H V + GLY + T + + GY DL
Sbjct: 45 KKIEWNSRVVSTCHSLVVGIFGLYIFLFDEATKADPLWGGPSLANVNIAIASGYLISDLS 104
Query: 372 WCFVYW---GDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFLK 542
+YW GD + ++HH ++L A + + L E+++P + RWF +
Sbjct: 105 IIILYWKVIGDKF-FIMHHCASLYAYYLVLKNGVLAYIGNFRL-LAELSSPFVNQRWFFE 162
Query: 543 SNGYAK 560
+ Y K
Sbjct: 163 ALKYPK 168
>BC015232-1|AAH15232.2| 148|Homo sapiens transmembrane protein 136
protein.
Length = 148
Score = 36.7 bits (81), Expect = 0.063
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +3
Query: 135 LISFVTWSWLYLWFAR-DGNKSPEWCSRAVTLLHGSVATVVGLYQCGAEAITP-CRLTMK 308
L S W LY+ F + ++S EW R VT HG ++ + Y + P
Sbjct: 32 LCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSP 91
Query: 309 TTPWHYALMLWSWGYFAFDL--LWCFVY 386
TP ++ + GYF FDL +W F +
Sbjct: 92 NTPLQVHVLCLTLGYFIFDLGCIWRFAW 119
>AY358726-1|AAQ89088.1| 246|Homo sapiens GPQH2552 protein.
Length = 246
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 114 STASLLKLISFVTWSWLYLWFARDGNKSPEWCSRAVTLLH-GSVATVVGLYQCGAEAITP 290
+TAS + ++F W WL + K E C + + G+ VVG C + + P
Sbjct: 32 ATASRFRAVAFHNWKWLLM--RNMVCKLQEGCEETLVFIETGTARGVVGFKGCSSSSSYP 89
Query: 291 CRLTMKTTP 317
+++ +P
Sbjct: 90 AQISYLVSP 98
>AK129846-1|BAC85241.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ26336 fis, clone HRT02842. ).
Length = 236
Score = 30.3 bits (65), Expect = 5.5
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 321 HYALMLWSWGYFAFDLLWC-FVYWGDHYLMLVH-HTSALVAVTVYTQKDYTGCTFACTLA 494
H ++ + Y + C F+Y H M +H H A + V YT+ C F CT A
Sbjct: 52 HAYAYIYVYSYTRICIHICIFIYTHMHTYMYIHIHAYAYIYVYSYTRICIHICVFICTHA 111
Query: 495 FLEV 506
++ V
Sbjct: 112 YIYV 115
>BC075855-1|AAH75855.1| 585|Homo sapiens suppression of
tumorigenicity 7 protein.
Length = 585
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 108 ELSTASLLKLISFVTWSWLYLW 173
E +T L +L S + WSW YLW
Sbjct: 3 EAATGFLEQLKSCIVWSWTYLW 24
>BC030954-1|AAH30954.1| 547|Homo sapiens ST7 protein protein.
Length = 547
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 108 ELSTASLLKLISFVTWSWLYLW 173
E +T L +L S + WSW YLW
Sbjct: 3 EAATGFLEQLKSCIVWSWTYLW 24
>AF234886-1|AAF85949.1| 50|Homo sapiens FAM4A1 protein.
Length = 50
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 108 ELSTASLLKLISFVTWSWLYLW 173
E +T L +L S + WSW YLW
Sbjct: 3 EAATGFLEQLKSCIVWSWTYLW 24
>AF234883-1|AAF85946.1| 585|Homo sapiens FAM4A1 splice variant b
protein.
Length = 585
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 108 ELSTASLLKLISFVTWSWLYLW 173
E +T L +L S + WSW YLW
Sbjct: 3 EAATGFLEQLKSCIVWSWTYLW 24
>AF234882-1|AAF85945.1| 554|Homo sapiens FAM4A1 splice variant a
protein.
Length = 554
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 108 ELSTASLLKLISFVTWSWLYLW 173
E +T L +L S + WSW YLW
Sbjct: 3 EAATGFLEQLKSCIVWSWTYLW 24
>AC106873-1|AAS07529.1| 50|Homo sapiens unknown protein.
Length = 50
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 108 ELSTASLLKLISFVTWSWLYLW 173
E +T L +L S + WSW YLW
Sbjct: 3 EAATGFLEQLKSCIVWSWTYLW 24
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,200,445
Number of Sequences: 237096
Number of extensions: 1909611
Number of successful extensions: 7833
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7829
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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