Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21d16
(441 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541727-1|CAG46528.1| 129|Homo sapiens COX5B protein. 74 3e-13
BT006742-1|AAP35388.1| 129|Homo sapiens cytochrome c oxidase su... 74 3e-13
BC006229-1|AAH06229.1| 129|Homo sapiens cytochrome c oxidase su... 74 3e-13
AC017099-1|AAY24279.1| 129|Homo sapiens unknown protein. 74 3e-13
CR541753-1|CAG46553.1| 129|Homo sapiens COX5B protein. 73 3e-13
M59250-1|AAA52060.1| 129|Homo sapiens COX5B protein. 73 4e-13
M19961-1|AAA52061.1| 129|Homo sapiens COX5B protein. 73 4e-13
BC113605-1|AAI13606.1| 1063|Homo sapiens valyl-tRNA synthetase 2... 30 3.1
BC112054-1|AAI12055.1| 1063|Homo sapiens valyl-tRNA synthetase 2... 30 3.1
BC073838-1|AAH73838.1| 657|Homo sapiens VARS2 protein protein. 30 3.1
BC008844-1|AAH08844.2| 516|Homo sapiens VARS2 protein protein. 30 3.1
AL669830-5|CAI18004.1| 1063|Homo sapiens valyl-tRNA synthetase l... 30 3.1
AL662854-14|CAI17437.1| 1063|Homo sapiens valyl-tRNA synthetase ... 30 3.1
AB067472-1|BAB67778.1| 1098|Homo sapiens KIAA1885 protein protein. 30 3.1
>CR541727-1|CAG46528.1| 129|Homo sapiens COX5B protein.
Length = 129
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 TGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESDNHLKFM 316
TG+E+ +LA G DP+ +L+ K GTRE PNL+PS ++ R++ C C E + + +
Sbjct: 45 TGLEREIMLAAKKG-LDPYNVLAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWF 103
Query: 317 WLHQGDPKRC-GCGYWFELCP 376
WLH+G+ +RC CG ++L P
Sbjct: 104 WLHKGEAQRCPRCGAHYKLVP 124
>BT006742-1|AAP35388.1| 129|Homo sapiens cytochrome c oxidase
subunit Vb protein.
Length = 129
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 TGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESDNHLKFM 316
TG+E+ +LA G DP+ +L+ K GTRE PNL+PS ++ R++ C C E + + +
Sbjct: 45 TGLEREIMLAAKKG-LDPYNVLAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWF 103
Query: 317 WLHQGDPKRC-GCGYWFELCP 376
WLH+G+ +RC CG ++L P
Sbjct: 104 WLHKGEAQRCPRCGAHYKLVP 124
>BC006229-1|AAH06229.1| 129|Homo sapiens cytochrome c oxidase
subunit Vb protein.
Length = 129
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 TGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESDNHLKFM 316
TG+E+ +LA G DP+ +L+ K GTRE PNL+PS ++ R++ C C E + + +
Sbjct: 45 TGLEREIMLAAKKG-LDPYNVLAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWF 103
Query: 317 WLHQGDPKRC-GCGYWFELCP 376
WLH+G+ +RC CG ++L P
Sbjct: 104 WLHKGEAQRCPRCGAHYKLVP 124
>AC017099-1|AAY24279.1| 129|Homo sapiens unknown protein.
Length = 129
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 TGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESDNHLKFM 316
TG+E+ +LA G DP+ +L+ K GTRE PNL+PS ++ R++ C C E + + +
Sbjct: 45 TGLEREIMLAAKKG-LDPYNVLAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWF 103
Query: 317 WLHQGDPKRC-GCGYWFELCP 376
WLH+G+ +RC CG ++L P
Sbjct: 104 WLHKGEAQRCPRCGAHYKLVP 124
>CR541753-1|CAG46553.1| 129|Homo sapiens COX5B protein.
Length = 129
Score = 73.3 bits (172), Expect = 3e-13
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 TGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESDNHLKFM 316
TG+E+ +LA G DP+ +L+ K GTRE PNL+PS + R++ C C E + + +
Sbjct: 45 TGLEREIMLAAKKG-LDPYNVLAPKGASGTREDPNLVPSISDKRIVGCICEEDNTSVVWF 103
Query: 317 WLHQGDPKRC-GCGYWFELCP 376
WLH+G+ +RC CG ++L P
Sbjct: 104 WLHKGEAQRCPRCGAHYKLVP 124
>M59250-1|AAA52060.1| 129|Homo sapiens COX5B protein.
Length = 129
Score = 72.9 bits (171), Expect = 4e-13
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 TGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESDNHLKFM 316
TG+E+ +LA G DP+ +L+ K GTRE PNL+PS ++ R++ C C E + + +
Sbjct: 45 TGLEREIMLAAKKG-LDPYNVLAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWF 103
Query: 317 WLHQGDPKRC-GCGYWFELCP 376
WLH+G +RC CG ++L P
Sbjct: 104 WLHKGQAQRCPRCGAHYKLVP 124
>M19961-1|AAA52061.1| 129|Homo sapiens COX5B protein.
Length = 129
Score = 72.9 bits (171), Expect = 4e-13
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 TGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESDNHLKFM 316
TG+E+ +LA G DP+ +L+ K GTRE PNL+PS ++ R++ C C E + + +
Sbjct: 45 TGLEREIMLAAKKG-LDPYNVLAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWF 103
Query: 317 WLHQGDPKRC-GCGYWFELCP 376
WLH+G +RC CG ++L P
Sbjct: 104 WLHKGQAQRCPRCGAHYKLVP 124
>BC113605-1|AAI13606.1| 1063|Homo sapiens valyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 1063
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +2
Query: 113 LIDPLDLLTGIEKRELLAHL-AGDCDPFRILSIKKGPGTRERPNLIPSSNSSRL---ICC 280
++DP D+++G+E + L L +G+ DP L+I ++ P+ IP + L +C
Sbjct: 666 VLDPRDIISGVEMQVLQEKLRSGNLDPAE-LAIVAAAQKKDFPHGIPECGTDALRFTLCS 724
Query: 281 HCTES-DNHL 307
H ++ D HL
Sbjct: 725 HGVQAGDLHL 734
>BC112054-1|AAI12055.1| 1063|Homo sapiens valyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 1063
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +2
Query: 113 LIDPLDLLTGIEKRELLAHL-AGDCDPFRILSIKKGPGTRERPNLIPSSNSSRL---ICC 280
++DP D+++G+E + L L +G+ DP L+I ++ P+ IP + L +C
Sbjct: 666 VLDPRDIISGVEMQVLQEKLRSGNLDPAE-LAIVAAAQKKDFPHGIPECGTDALRFTLCS 724
Query: 281 HCTES-DNHL 307
H ++ D HL
Sbjct: 725 HGVQAGDLHL 734
>BC073838-1|AAH73838.1| 657|Homo sapiens VARS2 protein protein.
Length = 657
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +2
Query: 113 LIDPLDLLTGIEKRELLAHL-AGDCDPFRILSIKKGPGTRERPNLIPSSNSSRL---ICC 280
++DP D+++G+E + L L +G+ DP L+I ++ P+ IP + L +C
Sbjct: 260 VLDPRDIISGVEMQVLQEKLRSGNLDPAE-LAIVAAAQKKDFPHGIPECGTDALRFTLCS 318
Query: 281 HCTES-DNHL 307
H ++ D HL
Sbjct: 319 HGVQAGDLHL 328
>BC008844-1|AAH08844.2| 516|Homo sapiens VARS2 protein protein.
Length = 516
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +2
Query: 113 LIDPLDLLTGIEKRELLAHL-AGDCDPFRILSIKKGPGTRERPNLIPSSNSSRL---ICC 280
++DP D+++G+E + L L +G+ DP L+I ++ P+ IP + L +C
Sbjct: 119 VLDPRDIISGVEMQVLQEKLRSGNLDPAE-LAIVAAAQKKDFPHGIPECGTDALRFTLCS 177
Query: 281 HCTES-DNHL 307
H ++ D HL
Sbjct: 178 HGVQAGDLHL 187
>AL669830-5|CAI18004.1| 1063|Homo sapiens valyl-tRNA synthetase like
protein.
Length = 1063
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +2
Query: 113 LIDPLDLLTGIEKRELLAHL-AGDCDPFRILSIKKGPGTRERPNLIPSSNSSRL---ICC 280
++DP D+++G+E + L L +G+ DP L+I ++ P+ IP + L +C
Sbjct: 666 VLDPRDIISGVEMQVLQEKLRSGNLDPAE-LAIVAAAQKKDFPHGIPECGTDALRFTLCS 724
Query: 281 HCTES-DNHL 307
H ++ D HL
Sbjct: 725 HGVQAGDLHL 734
>AL662854-14|CAI17437.1| 1063|Homo sapiens valyl-tRNA synthetase
like protein.
Length = 1063
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +2
Query: 113 LIDPLDLLTGIEKRELLAHL-AGDCDPFRILSIKKGPGTRERPNLIPSSNSSRL---ICC 280
++DP D+++G+E + L L +G+ DP L+I ++ P+ IP + L +C
Sbjct: 666 VLDPRDIISGVEMQVLQEKLRSGNLDPAE-LAIVAAAQKKDFPHGIPECGTDALRFTLCS 724
Query: 281 HCTES-DNHL 307
H ++ D HL
Sbjct: 725 HGVQAGDLHL 734
>AB067472-1|BAB67778.1| 1098|Homo sapiens KIAA1885 protein protein.
Length = 1098
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +2
Query: 113 LIDPLDLLTGIEKRELLAHL-AGDCDPFRILSIKKGPGTRERPNLIPSSNSSRL---ICC 280
++DP D+++G+E + L L +G+ DP L+I ++ P+ IP + L +C
Sbjct: 701 VLDPRDIISGVEMQVLQEKLRSGNLDPAE-LAIVAAAQKKDFPHGIPECGTDALRFTLCS 759
Query: 281 HCTES-DNHL 307
H ++ D HL
Sbjct: 760 HGVQAGDLHL 769
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,577,829
Number of Sequences: 237096
Number of extensions: 1311869
Number of successful extensions: 2273
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2273
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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