Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21d16
(441 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-9|CAB03002.1| 132|Caenorhabditis elegans Hypothetical pr... 84 4e-17
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 2.6
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 2.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 2.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 2.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 2.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 2.6
Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane... 28 3.5
>Z81070-9|CAB03002.1| 132|Caenorhabditis elegans Hypothetical
protein F26E4.9 protein.
Length = 132
Score = 84.2 bits (199), Expect = 4e-17
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 119 DPLDLLTGIEKRELLAHLAGDCDPFRILSIKKGPGTRERPNLIPSSNSSRLICCHCTESD 298
DPL+ TG EK+ LLA LAGD + + T+++PNL+PS R+I C C +
Sbjct: 41 DPLEHATGREKKMLLARLAGDDRYEPKVYYRAEASTKQKPNLVPSHYDFRIIGCMCEQDS 100
Query: 299 NHLKFMWLHQGDPKRCGCGYWFE 367
H+ FM + +GDPKRC CG+WF+
Sbjct: 101 GHVNFMTIRKGDPKRCECGHWFK 123
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 86 RLGVRFYRKLIDPLDLLTGIEKRELLAHLAGDCDPFRILSIKK 214
++G + Y I+ L G + + +L++ AGDCD L++ K
Sbjct: 4922 KIGPKKYELAINRAQLDDGADYKVVLSNAAGDCDSSAALTVVK 4964
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 86 RLGVRFYRKLIDPLDLLTGIEKRELLAHLAGDCDPFRILSIKK 214
++G + Y I+ L G + + +L++ AGDCD L++ K
Sbjct: 4282 KIGPKKYELAINRAQLDDGADYKVVLSNAAGDCDSSAALTVVK 4324
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 86 RLGVRFYRKLIDPLDLLTGIEKRELLAHLAGDCDPFRILSIKK 214
++G + Y I+ L G + + +L++ AGDCD L++ K
Sbjct: 4922 KIGPKKYELAINRAQLDDGADYKVVLSNAAGDCDSSAALTVVK 4964
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 86 RLGVRFYRKLIDPLDLLTGIEKRELLAHLAGDCDPFRILSIKK 214
++G + Y I+ L G + + +L++ AGDCD L++ K
Sbjct: 4922 KIGPKKYELAINRAQLDDGADYKVVLSNAAGDCDSSAALTVVK 4964
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 86 RLGVRFYRKLIDPLDLLTGIEKRELLAHLAGDCDPFRILSIKK 214
++G + Y I+ L G + + +L++ AGDCD L++ K
Sbjct: 4282 KIGPKKYELAINRAQLDDGADYKVVLSNAAGDCDSSAALTVVK 4324
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 86 RLGVRFYRKLIDPLDLLTGIEKRELLAHLAGDCDPFRILSIKK 214
++G + Y I+ L G + + +L++ AGDCD L++ K
Sbjct: 4922 KIGPKKYELAINRAQLDDGADYKVVLSNAAGDCDSSAALTVVK 4964
>Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical
protein F56F3.2b protein.
Length = 685
Score = 27.9 bits (59), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 314 MWLHQGDPKRCGCGYW 361
MW+H RCG G+W
Sbjct: 380 MWIHTDTVNRCGSGWW 395
>Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical
protein F56F3.2a protein.
Length = 687
Score = 27.9 bits (59), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 314 MWLHQGDPKRCGCGYW 361
MW+H RCG G+W
Sbjct: 380 MWIHTDTVNRCGSGWW 395
>AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane
protein NDG-4 protein.
Length = 687
Score = 27.9 bits (59), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 314 MWLHQGDPKRCGCGYW 361
MW+H RCG G+W
Sbjct: 380 MWIHTDTVNRCGSGWW 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,819,761
Number of Sequences: 27780
Number of extensions: 204033
Number of successful extensions: 559
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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