Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21d15
         (451 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   0.88 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   3.6  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   4.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.2  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 262 LNNYSDPNFVENLQKNDLH 318
           +NNY+DP+ V N +   LH
Sbjct: 158 VNNYNDPSNVRNCELVGLH 176


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 205 NNATAGHEKLHEAMQMASELNNYSDPNFVENLQKNDLHKQE 327
           N  T    +L      + E+N+  + NF+ +  +NDL + E
Sbjct: 69  NQDTEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECE 109


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 75  IHC*CFCYVKENTKRVG 25
           I C CFC  + NT R G
Sbjct: 76  IICKCFCKRRTNTLRRG 92


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 75  IHC*CFCYVKENTKRVG 25
           I C CFC  + NT R G
Sbjct: 524 IICKCFCKRRTNTLRRG 540


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 4   IFL*QILTYTFCIFFYVAKTL 66
           I +  ILTY   +F+Y++ T+
Sbjct: 323 IIIYTILTYMSGVFYYLSTTV 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,735
Number of Sequences: 438
Number of extensions: 1978
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)