BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21d14
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075367-1|AAL68214.1| 180|Drosophila melanogaster GM12126p pro... 270 8e-73
AE014297-3645|AAF56348.1| 180|Drosophila melanogaster CG7006-PA... 270 8e-73
AY060800-1|AAL28348.1| 985|Drosophila melanogaster GH26463p pro... 30 2.9
AE013599-3767|AAF47129.2| 985|Drosophila melanogaster CG3105-PA... 30 2.9
AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA... 29 6.8
AE013599-2318|AAF57974.1| 625|Drosophila melanogaster CG5065-PA... 28 9.0
>AY075367-1|AAL68214.1| 180|Drosophila melanogaster GM12126p
protein.
Length = 180
Score = 270 bits (663), Expect = 8e-73
Identities = 119/179 (66%), Positives = 150/179 (83%)
Frame = +2
Query: 74 MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKP 253
MK LS++R +ILFE L+KYIG NVK LIDRPDGTYCFRE KDRVYY+SE++L L++
Sbjct: 1 MKRLSDERAKILFEHLSKYIGTNVKHLIDRPDGTYCFREHKDRVYYVSERILKLSECFGY 60
Query: 254 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 433
LV GTCFGKF+KTNK + HITAL Y++PYA +KVWVKPS EQQFLYG+HI K+GLGR
Sbjct: 61 KQLVCVGTCFGKFSKTNKLKFHITALYYLAPYAQYKVWVKPSFEQQFLYGNHIPKTGLGR 120
Query: 434 ITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTL 610
ITEN ++QGVVV +M+D+P+GFGV +R+T +C+ ADP+ T+ FHQ+D+GEYIR+EDTL
Sbjct: 121 ITENAGQYQGVVVYSMNDLPLGFGVLARSTTDCKTADPMTTVCFHQSDIGEYIRAEDTL 179
>AE014297-3645|AAF56348.1| 180|Drosophila melanogaster CG7006-PA
protein.
Length = 180
Score = 270 bits (663), Expect = 8e-73
Identities = 119/179 (66%), Positives = 150/179 (83%)
Frame = +2
Query: 74 MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKP 253
MK LS++R +ILFE L+KYIG NVK LIDRPDGTYCFRE KDRVYY+SE++L L++
Sbjct: 1 MKRLSDERAKILFEHLSKYIGTNVKHLIDRPDGTYCFREHKDRVYYVSERILKLSECFGY 60
Query: 254 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 433
LV GTCFGKF+KTNK + HITAL Y++PYA +KVWVKPS EQQFLYG+HI K+GLGR
Sbjct: 61 KQLVCVGTCFGKFSKTNKLKFHITALYYLAPYAQYKVWVKPSFEQQFLYGNHIPKTGLGR 120
Query: 434 ITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTL 610
ITEN ++QGVVV +M+D+P+GFGV +R+T +C+ ADP+ T+ FHQ+D+GEYIR+EDTL
Sbjct: 121 ITENAGQYQGVVVYSMNDLPLGFGVLARSTTDCKTADPMTTVCFHQSDIGEYIRAEDTL 179
>AY060800-1|AAL28348.1| 985|Drosophila melanogaster GH26463p
protein.
Length = 985
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 152 LIDRPDGTYCFREKKDRVYYISE-KLLHLAQTVKPDNLV 265
L+D G+Y FR+ D V Y+ E K+LH + +K +N++
Sbjct: 676 LMDEKLGSYIFRQVADAVNYLHEQKILH--RDIKDENII 712
>AE013599-3767|AAF47129.2| 985|Drosophila melanogaster CG3105-PA
protein.
Length = 985
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 152 LIDRPDGTYCFREKKDRVYYISE-KLLHLAQTVKPDNLV 265
L+D G+Y FR+ D V Y+ E K+LH + +K +N++
Sbjct: 676 LMDEKLGSYIFRQVADAVNYLHEQKILH--RDIKDENII 712
>AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA
protein.
Length = 1978
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 563 RQSSPKDQRVDILPSFLKLRQSQSEYLTSLIPPHLDVSVYFLLSGPSH 420
R +++ VDIL LKL Q + + + S + P LD FL H
Sbjct: 1417 RSLKTREEEVDILKEKLKLCQEREKSVESTVNPELDQLRIFLDEKDKH 1464
>AE013599-2318|AAF57974.1| 625|Drosophila melanogaster CG5065-PA
protein.
Length = 625
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -1
Query: 599 QSVYILLRRPGGRQSSPKDQRVDILPSFLKLRQSQSEYLTSLIPPHLDVS 450
+++Y+L+R G++ S + + P F LRQ + + L+ +IP D++
Sbjct: 153 RNIYLLIRPKRGQEVSARLTELLNAPLFESLRQEKPKELSKVIPISGDIT 202
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,536,853
Number of Sequences: 53049
Number of extensions: 635358
Number of successful extensions: 1501
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -