BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21d09
(455 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061243-1|AAL28791.1| 249|Drosophila melanogaster LD18367p pro... 44 1e-04
AE014297-1008|AAO41529.1| 249|Drosophila melanogaster CG32939-P... 44 1e-04
AE014297-1002|AAG22138.1| 249|Drosophila melanogaster CG18542-P... 44 1e-04
BT025858-1|ABF85758.1| 592|Drosophila melanogaster IP15543p pro... 32 0.42
AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p pro... 29 2.2
AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA... 29 2.2
AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA ... 29 3.0
BT021948-1|AAX51653.1| 772|Drosophila melanogaster LD13191p pro... 27 9.1
AE014296-3304|AAN11624.1| 981|Drosophila melanogaster CG17233-P... 27 9.1
AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-P... 27 9.1
AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-P... 27 9.1
>AY061243-1|AAL28791.1| 249|Drosophila melanogaster LD18367p
protein.
Length = 249
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +3
Query: 183 VLVRQARPEDQDARVTLVRLGLAEYNFPAFLYFFLQEVMLQFVLLCCAVLFIFFSTPLWI 362
+++R +D+ LVR + ++ +F + +E+ LQF+++ A+ FIF PL
Sbjct: 5 IVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVITWAIFFIFLGVPLLF 64
Query: 363 CVLPGPA 383
C L PA
Sbjct: 65 CALTVPA 71
>AE014297-1008|AAO41529.1| 249|Drosophila melanogaster CG32939-PA
protein.
Length = 249
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +3
Query: 183 VLVRQARPEDQDARVTLVRLGLAEYNFPAFLYFFLQEVMLQFVLLCCAVLFIFFSTPLWI 362
+++R +D+ LVR + ++ +F + +E+ LQF+++ A+ FIF PL
Sbjct: 5 IVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVITWAIFFIFLGVPLLF 64
Query: 363 CVLPGPA 383
C L PA
Sbjct: 65 CALTVPA 71
>AE014297-1002|AAG22138.1| 249|Drosophila melanogaster CG18542-PA
protein.
Length = 249
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +3
Query: 183 VLVRQARPEDQDARVTLVRLGLAEYNFPAFLYFFLQEVMLQFVLLCCAVLFIFFSTPLWI 362
+++R +D+ LVR + ++ +F + +E+ LQF+++ A+ FIF PL
Sbjct: 5 IVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVITWAIFFIFLGVPLLF 64
Query: 363 CVLPGPA 383
C L PA
Sbjct: 65 CALTVPA 71
>BT025858-1|ABF85758.1| 592|Drosophila melanogaster IP15543p
protein.
Length = 592
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 291 EVMLQFVLLCCAVLFIFFSTPLWICVLPGPALAIVTYIXCTCVHIELGHKHKRKV 455
+VM+ + +C + F++PL++CV P +++++ + TC H+R V
Sbjct: 507 KVMMSLLCVCILRTSVLFASPLYVCV-PHVRMSLLSPVVVTCKTFSSTSLHRRFV 560
>AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p
protein.
Length = 1071
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 322 VRCCLYSSVLHCGYVCYQVLH 384
+ CC YSS HC + C +LH
Sbjct: 284 IPCCEYSSKEHCRHTCRNLLH 304
>AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA
protein.
Length = 1071
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 322 VRCCLYSSVLHCGYVCYQVLH 384
+ CC YSS HC + C +LH
Sbjct: 284 IPCCEYSSKEHCRHTCRNLLH 304
>AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA
protein.
Length = 753
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 370 STHIHNGVLKNINSTAQHSKTNCSITSCKKK*RKAGK 260
+TH HN N N + ++ ++CS+ KKK ++ G+
Sbjct: 620 TTHNHNHQNHNHNHSNDNNSSSCSLFQSKKKRKRCGE 656
>BT021948-1|AAX51653.1| 772|Drosophila melanogaster LD13191p
protein.
Length = 772
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 365 TYPQWSTEEYKQHRTAQQDKLQH 297
TYPQ S ++ Q + AQQ + QH
Sbjct: 304 TYPQQSQQQQHQQQQAQQQQQQH 326
>AE014296-3304|AAN11624.1| 981|Drosophila melanogaster CG17233-PB,
isoform B protein.
Length = 981
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 365 TYPQWSTEEYKQHRTAQQDKLQH 297
TYPQ S ++ Q + AQQ + QH
Sbjct: 112 TYPQQSQQQQHQQQQAQQQQQQH 134
>AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-PC,
isoform C protein.
Length = 1465
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 365 TYPQWSTEEYKQHRTAQQDKLQH 297
TYPQ S ++ Q + AQQ + QH
Sbjct: 596 TYPQQSQQQQHQQQQAQQQQQQH 618
>AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-PA,
isoform A protein.
Length = 1173
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 365 TYPQWSTEEYKQHRTAQQDKLQH 297
TYPQ S ++ Q + AQQ + QH
Sbjct: 304 TYPQQSQQQQHQQQQAQQQQQQH 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,919,878
Number of Sequences: 53049
Number of extensions: 459057
Number of successful extensions: 1365
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -