Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21d09
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 30 0.92
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 30 0.92
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 0.92
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 30 0.92
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 30 0.92
AL032623-15|CAJ76975.1| 260|Caenorhabditis elegans Hypothetical... 30 0.92
AL032623-2|CAD54165.1| 312|Caenorhabditis elegans Hypothetical ... 30 0.92
AL032623-1|CAA21508.2| 309|Caenorhabditis elegans Hypothetical ... 30 0.92
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 29 1.2
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 29 1.6
AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical ... 29 1.6
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 27 4.9
U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 27 6.5
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 27 8.6
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 27 8.6
AF016672-6|AAM34394.2| 165|Caenorhabditis elegans Vig (drosophi... 27 8.6
AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.9 bits (64), Expect = 0.92
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 286 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 369
CR+ C C +CC RCC CG C
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 125
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.9 bits (64), Expect = 0.92
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 286 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 369
CR+ C C +CC RCC CG C
Sbjct: 95 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 123
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.9 bits (64), Expect = 0.92
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 286 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 369
CR+ C C +CC RCC CG C
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.9 bits (64), Expect = 0.92
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 286 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 369
CR+ C C +CC RCC CG C
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.9 bits (64), Expect = 0.92
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 286 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 369
CR+ C C +CC RCC CG C
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 125
>AL032623-15|CAJ76975.1| 260|Caenorhabditis elegans Hypothetical
protein Y43F8B.1c protein.
Length = 260
Score = 29.9 bits (64), Expect = 0.92
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 356 QWSTEEYKQHRTAQQDKLQHHFLQKKIEESW 264
QW E + H Q + LQ H KK+E W
Sbjct: 188 QWPPPEAEAHEREQVEVLQKHIPTKKMERQW 218
>AL032623-2|CAD54165.1| 312|Caenorhabditis elegans Hypothetical
protein Y43F8B.1b protein.
Length = 312
Score = 29.9 bits (64), Expect = 0.92
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 356 QWSTEEYKQHRTAQQDKLQHHFLQKKIEESW 264
QW E + H Q + LQ H KK+E W
Sbjct: 237 QWPPPEAEAHEREQVEVLQKHIPTKKMERQW 267
>AL032623-1|CAA21508.2| 309|Caenorhabditis elegans Hypothetical
protein Y43F8B.1a protein.
Length = 309
Score = 29.9 bits (64), Expect = 0.92
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 356 QWSTEEYKQHRTAQQDKLQHHFLQKKIEESW 264
QW E + H Q + LQ H KK+E W
Sbjct: 237 QWPPPEAEAHEREQVEVLQKHIPTKKMERQW 267
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 297 MLQFVLLCCAVLFIFFSTPLWICVLPGPALAIVTYIXCTCVHI 425
+LQ + + A LFI+F P W+ + P L + CT ++I
Sbjct: 216 LLQSLGVLVAALFIYFQ-PSWVIIDPICTLVFSVIVLCTTIYI 257
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -2
Query: 163 YHFYMQLMLQPDIQHVLGIIY*LH*TIAFSINDIY 59
++++M D+QH+L IIY + T+ F+ + +Y
Sbjct: 397 FYYFMCAYAHRDLQHILMIIYGIFTTLLFTSSTVY 431
>AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical
protein Y71G12B.23b protein.
Length = 537
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -2
Query: 163 YHFYMQLMLQPDIQHVLGIIY*LH*TIAFSINDIY 59
++++M D+QH+L IIY + T+ F+ + +Y
Sbjct: 397 FYYFMCAYAHRDLQHILMIIYGIFTTLLFTSSTVY 431
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +1
Query: 286 CRK*CCNL---SCCAVRCCLYSSVLHCGYVC 369
CR CC +CC RCC CG C
Sbjct: 77 CRPKCCCTCCRTCCCTRCCTCCRPCCCGCGC 107
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +1
Query: 286 CRK*CCNL---SCCAVRCCLYSSVLHCGYVC 369
CR CC +CC RCC CG C
Sbjct: 79 CRPKCCCTCCRTCCCTRCCTCCRPCCCGCGC 109
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +1
Query: 286 CRK*CCNL---SCCAVRCCLYSSVLHCGYVC 369
CR CC +CC RCC CG C
Sbjct: 82 CRPKCCCTCCRTCCCTRCCTCCRPCCCGCGC 112
>U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical
protein D1044.7 protein.
Length = 400
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 CAAGSPRRSGCPGHPSSARPC*IQFSSFPLFFFAGSDAAI-CLAVLCGAVYILQYS 352
C +GSP CP P+++ C SS ++ I CL +C QYS
Sbjct: 339 CTSGSPNNGICPTSPNTSNLC----SSGQTVQLDNNNQPINCLVTVCPNTSFCQYS 390
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 356 QWSTEEYKQHRTAQQ-DKLQHHFLQKKIEESWK 261
+WS EEYK R Q +KL+ L++KI E K
Sbjct: 423 EWSIEEYKHSRDTQYLNKLEE--LRRKINEKQK 453
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 177 CVVLVRQARPEDQDARVTLVRLGLAEYNFPAFLYFFLQEVMLQFVLL 317
C VR+ ++D V V +G+ E+N FL+F+ V L F L
Sbjct: 241 CDFQVREMAGNNRDETVECV-IGINEFNEKIFLFFWFWLVFLVFSTL 286
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Frame = +3
Query: 255 YNFPAFLYFFLQEVMLQFVLLC-----CAVLFI---FFSTPLWICVL 371
Y+ +LY Q++++Q V+LC A +++ FF +P WI ++
Sbjct: 228 YSTSMWLYRSKQQIVIQAVILCSFHAVAAYIYVYMQFFPSPPWIIII 274
>AF016672-6|AAM34394.2| 165|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform b
protein.
Length = 165
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 318 CCAVLFIFFSTPLWICVLPGPALAIVTYIXC 410
C ++F+FF P + +L PAL+I + C
Sbjct: 120 CLFLIFLFFLVPPFSLLLLSPALSISLLMSC 150
>AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical
protein C30F12.4 protein.
Length = 246
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 298 CCNLSCCAVRCCLYSSVLHCGYV 366
C + CC + CCL + C YV
Sbjct: 197 CLAVCCCPLTCCLPLICICCNYV 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,342,207
Number of Sequences: 27780
Number of extensions: 244515
Number of successful extensions: 1004
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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