Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21d05
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   4.5  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   4.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.9  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 546 QCTNWTSTLKLEKDRLPQWKSTECPSIMQSCLDITL 653
           QC   T   K   D+L +W +T  P      ++I +
Sbjct: 74  QCKKCTEIQKQNLDKLAEWFTTNEPEKWNHFVEIMI 109


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 546 QCTNWTSTLKLEKDRLPQWKSTECPSIMQSCLDITL 653
           QC   T   K   D+L +W +T  P      ++I +
Sbjct: 74  QCKKCTEIQKQNLDKLAEWFTTNEPEKWNHFVEIMI 109


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 540 NNQCTNWTSTLK 575
           NNQ T W++T+K
Sbjct: 387 NNQRTEWSATVK 398


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 540 NNQCTNWTSTLK 575
           NNQ T W++T+K
Sbjct: 425 NNQRTEWSATVK 436


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,968
Number of Sequences: 438
Number of extensions: 3353
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)