Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21c23
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein. 31 4.3
AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein. 31 4.3
AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein. 31 4.3
AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein. 31 4.3
AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein. 31 4.3
AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein. 31 4.3
U77914-1|AAC50909.1| 263|Homo sapiens soluble protein Jagged pr... 29 9.9
U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jag... 29 9.9
U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein. 29 9.9
U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jag... 29 9.9
BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille synd... 29 9.9
BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille synd... 29 9.9
BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille synd... 29 9.9
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 29 9.9
AL353779-1|CAI20975.1| 250|Homo sapiens chromosome 1 open readi... 29 9.9
AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille synd... 29 9.9
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 29 9.9
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 29 9.9
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 29 9.9
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 29 9.9
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 29 9.9
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 29 9.9
AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein J... 29 9.9
AF005081-1|AAB83961.1| 112|Homo sapiens skin-specific protein p... 29 9.9
AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein. 29 9.9
>Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.
Length = 1223
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + N PCYN C+D N FRC C ++G D ++ ++C + SP
Sbjct: 771 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 820
>AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.
Length = 1238
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + N PCYN C+D N FRC C ++G D ++ ++C + SP
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835
>AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.
Length = 1200
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + N PCYN C+D N FRC C ++G D ++ ++C + SP
Sbjct: 748 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 797
>AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.
Length = 1238
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + N PCYN C+D N FRC C ++G D ++ ++C + SP
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835
>AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.
Length = 1238
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + N PCYN C+D N FRC C ++G D ++ ++C + SP
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835
>AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.
Length = 1238
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + N PCYN C+D N FRC C ++G D ++ ++C + SP
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835
>U77914-1|AAC50909.1| 263|Homo sapiens soluble protein Jagged
protein.
Length = 263
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 37 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 86
>U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jagged
protein.
Length = 1214
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 766 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 815
>U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 779 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 828
>U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jagged
1 protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 779 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 828
>BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 779 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 828
>BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 779 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 828
>BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 779 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 828
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 TKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLK 319
TK EDK E ALR + + ++ L+ +K E K ++ +Y D++ +LK
Sbjct: 14 TKATEEDKAKNYEEALRLYQHAVEYF--LHAIKYEAHSDKAKESIRAKCVQYLDRAEKLK 71
Query: 320 GCI-SSVLQGVRPCVGNEYANHINDAQN 400
+ S G +P N+ +D+ +
Sbjct: 72 DYLRSKEKHGKKPVKENQSEGKGSDSDS 99
>AL353779-1|CAI20975.1| 250|Homo sapiens chromosome 1 open reading
frame 68 protein.
Length = 250
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -1
Query: 357 QGRTPCSTELIQPFS*ALLSQYFLKTSSSAPFGLASSISVFRTFKSTSPLRQF 199
QG +PC + +Q + SQY + SAP + RTF SPLR++
Sbjct: 135 QGASPCQSYYVQAPASGSTSQYCVTDPCSAPCSTSYCCLAPRTF-GVSPLRRW 186
>AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 779 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 828
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 TKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLK 319
TK EDK E ALR + + ++ L+ +K E K ++ +Y D++ +LK
Sbjct: 14 TKATEEDKAKNYEEALRLYQHAVEYF--LHAIKYEAHSDKAKESIRAKCVQYLDRAEKLK 71
Query: 320 GCI-SSVLQGVRPCVGNEYANHINDAQN 400
+ S G +P N+ +D+ +
Sbjct: 72 DYLRSKEKHGKKPVKENQSEGKGSDSDS 99
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 TKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLK 319
TK EDK E ALR + + ++ L+ +K E K ++ +Y D++ +LK
Sbjct: 14 TKATEEDKAKNYEEALRLYQHAVEYF--LHAIKYEAHSDKAKESIRAKCVQYLDRAEKLK 71
Query: 320 GCI-SSVLQGVRPCVGNEYANHINDAQN 400
+ S G +P N+ +D+ +
Sbjct: 72 DYLRSKEKHGKKPVKENQSEGKGSDSDS 99
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 TKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLK 319
TK EDK E ALR + + ++ L+ +K E K ++ +Y D++ +LK
Sbjct: 14 TKATEEDKAKNYEEALRLYQHAVEYF--LHAIKYEAHSDKAKESIRAKCVQYLDRAEKLK 71
Query: 320 GCI-SSVLQGVRPCVGNEYANHINDAQN 400
+ S G +P N+ +D+ +
Sbjct: 72 DYLRSKEKHGKKPVKENQSEGKGSDSDS 99
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 TKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLK 319
TK EDK E ALR + + ++ L+ +K E K ++ +Y D++ +LK
Sbjct: 9 TKATEEDKAKNYEEALRLYQHAVEYF--LHAIKYEAHSDKAKESIRAKCVQYLDRAEKLK 66
Query: 320 GCI-SSVLQGVRPCVGNEYANHINDAQN 400
+ S G +P N+ +D+ +
Sbjct: 67 DYLRSKEKHGKKPVKENQSEGKGSDSDS 94
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 TKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLK 319
TK EDK E ALR + + ++ L+ +K E K ++ +Y D++ +LK
Sbjct: 14 TKATEEDKAKNYEEALRLYQHAVEYF--LHAIKYEAHSDKAKESIRAKCVQYLDRAEKLK 71
Query: 320 GCISSVLQ-GVRPCVGNEYANHINDAQN 400
+ S + G +P N+ +D+ +
Sbjct: 72 DYLRSKEEHGKKPVKENQSEGKGSDSDS 99
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 TKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLK 319
TK EDK E ALR + + ++ L+ +K E K ++ +Y D++ +LK
Sbjct: 14 TKATEEDKAKNYEEALRLYQHAVEYF--LHAIKYEAHSDKAKESIRAKCVQYLDRAEKLK 71
Query: 320 GCISSVLQ-GVRPCVGNEYANHINDAQN 400
+ S + G +P N+ +D+ +
Sbjct: 72 DYLRSKEEHGKKPVKENQSEGKGSDSDS 99
>AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein
Jagged 1 protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 779 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 828
>AF005081-1|AAB83961.1| 112|Homo sapiens skin-specific protein
protein.
Length = 112
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -1
Query: 357 QGRTPCSTELIQPFS*ALLSQYFLKTSSSAPFGLASSISVFRTFKSTSPLRQF 199
QG +PC + +Q + SQY + SAP + RTF SPLR++
Sbjct: 5 QGASPCQSYYVQAPASGSTSQYCVTDPCSAPCSTSYCCLAPRTF-GVSPLRRW 56
>AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 CVSNLSKSNKFPCYNDVEDCLDND--FRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
C N + + PCYN C+D D +RC C ++G D ++ +C + SP
Sbjct: 779 CAQNTNDCSPHPCYNS-GTCVDGDNWYRCECA-----PGFAGPDCRININEC-QSSP 828
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,792,806
Number of Sequences: 237096
Number of extensions: 1704057
Number of successful extensions: 8327
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8327
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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