Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21c19
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   2.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.5  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
          protein 4 protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 64 YKFITYFFLF*MLHYSWHVD 5
          Y ++   +LF  +HY W  D
Sbjct: 2  YSYLIPLYLFLFVHYGWSED 21


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = +1

Query: 142 LLEITQPWVMELYVLV 189
           ++ + Q W+ +LY+L+
Sbjct: 199 IISLVQLWIFQLYLLI 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,894
Number of Sequences: 336
Number of extensions: 2225
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)