Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21c18
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   10.0 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   10.0 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   10.0 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   10.0 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   10.0 

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 136 WKVLLNNNSWTKFFE 92
           W+ L N   WT FF+
Sbjct: 219 WRKLRNIVHWTPFFQ 233


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 136 WKVLLNNNSWTKFFE 92
           W+ L N   WT FF+
Sbjct: 134 WRKLRNIVHWTPFFQ 148


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 136 WKVLLNNNSWTKFFE 92
           W+ L N   WT FF+
Sbjct: 453 WRKLRNIVHWTPFFQ 467


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 346 GFHFLGWYKE 317
           G HF+ WYK+
Sbjct: 361 GPHFITWYKD 370


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 346 GFHFLGWYKE 317
           G HF+ WYK+
Sbjct: 361 GPHFITWYKD 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.133    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,138
Number of Sequences: 438
Number of extensions: 2492
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)