Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21c16
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   3.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.4  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 401 TSAAPITIQLRTTP 442
           TSA P TI+ R TP
Sbjct: 327 TSARPTTIETRVTP 340


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 233 STSDQLAAVCTWSPTDIYFTKTEAHILVASR 325
           ST   L A    +PT+  +   EAHI VA +
Sbjct: 138 STLYALGAKIIRTPTEASWHSPEAHISVAQK 168


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 132 AWIKGFSK*KFTFSLAQYNHL 70
           AWI   S  KF F   QY  L
Sbjct: 71  AWIGELSATKFGFPCLQYTQL 91


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 132 AWIKGFSK*KFTFSLAQYNHL 70
           AWI   S  KF F   QY  L
Sbjct: 71  AWIGELSATKFGFPCLQYTQL 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,267
Number of Sequences: 438
Number of extensions: 3154
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)