Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21c02
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...    29   0.088
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   5.8  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   5.8  
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      23   7.7  

>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
           initiation factor 4C (1A) protein.
          Length = 148

 Score = 29.5 bits (63), Expect = 0.088
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -3

Query: 446 RGFAQLGQEKLKLIFLEYHVIFLKITKQLPVG---MRCFFGIKDSLCHSPCLRLPLSNNL 276
           RG  +   EK +LIF E    + ++TK L  G     CF G+K  LCH   +R  L   +
Sbjct: 14  RGKNENESEKRELIFKEDEQEYAQVTKMLGNGRLEAMCFDGVK-RLCH---IRGKLRKKV 69

Query: 275 YIN 267
           +IN
Sbjct: 70  WIN 72


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 539 LRMISYMILIVIVFALMWS 595
           ++ +   I+IVIVF L WS
Sbjct: 450 VKTVKMTIVIVIVFVLCWS 468


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 545 MISYMILIVIVFALMW 592
           MI  M+ +VIVF + W
Sbjct: 487 MIKMMVTVVIVFTICW 502


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 493 YQLVSNCRRILLELSRAASPS 431
           YQL  + +  L+E+ R A+P+
Sbjct: 145 YQLTDSAKYYLMEIDRVAAPN 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,069
Number of Sequences: 2352
Number of extensions: 10600
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)