Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21b18
         (608 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0520 - 19951590-19952174                                         28   6.7  
04_01_0476 + 6215401-6217445,6217538-6217630,6218031-6218133,621...    27   8.8  

>12_02_0520 - 19951590-19952174
          Length = 194

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 583 VVSSTIFSMDQALIYFFFVVQSATFLVFVVVKKREPVDSHIPI 455
           VV+ ++FS DQA+ Y      +A     VV K+ +P    +P+
Sbjct: 90  VVAWSVFSCDQAVAYALMAATAAALQSSVVGKRGQPELQWMPV 132


>04_01_0476 +
           6215401-6217445,6217538-6217630,6218031-6218133,
           6218237-6218254
          Length = 752

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 426 LSSQFTRLCNMGI*ESTGSRFFTTTKTRNVAD 521
           +SSQ+  LC      S GS+   TT+++NVA+
Sbjct: 334 MSSQWENLCKPLQSTSKGSKLIVTTRSQNVAN 365


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,398,805
Number of Sequences: 37544
Number of extensions: 298468
Number of successful extensions: 623
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)