Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21b18
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23518-1|AAC70883.1|  124|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF039710-2|AAB96690.1|  419|Caenorhabditis elegans Hypothetical ...    27   7.9  

>U23518-1|AAC70883.1|  124|Caenorhabditis elegans Hypothetical
           protein F21D12.2 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 247 LFNQVWLPPKNGRLIRNSFHNSKRGSRQALKPDPLENLHIETG 375
           LF   +  P     +   F++SKR  +   +PD LEN  +E G
Sbjct: 21  LFFMPFFMPTYAYYLSAFFYSSKRRKKNDFRPDCLENTVVEQG 63


>AF039710-2|AAB96690.1|  419|Caenorhabditis elegans Hypothetical
           protein C46E10.5 protein.
          Length = 419

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = -2

Query: 508 LVFVVVKKREPVDSHIPILHSLVNWLL 428
           L F+ VKKRE +  HIP L S VN LL
Sbjct: 25  LKFLSVKKREQIHIHIPELRS-VNALL 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,905,719
Number of Sequences: 27780
Number of extensions: 267983
Number of successful extensions: 642
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)