Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21b15
(536 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447 30 1.3
10_08_0746 - 20266701-20266709,20266935-20267063,20267791-20268582 29 1.8
03_03_0206 + 15447054-15447181,15448243-15448298,15448373-154485... 29 1.8
01_01_1215 + 9815918-9816218,9816772-9816912,9816988-9817106,981... 29 1.8
08_01_0764 - 7332969-7333870,7334044-7334369,7334712-7335384,733... 29 2.3
11_01_0177 + 1406725-1406920,1407444-1408267 29 3.1
12_02_0616 - 21246374-21246462,21246605-21247702,21247800-212481... 28 4.1
01_01_0376 + 2926426-2927040,2927150-2927239,2927674-2927892 28 5.4
09_02_0363 - 7871730-7871853,7871986-7872075,7872720-7872799,787... 27 7.2
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 27 7.2
07_01_0314 - 2219664-2221091 27 7.2
12_01_0178 + 1316730-1316949,1317781-1318655 27 9.5
06_01_0020 + 212055-213440 27 9.5
01_01_0643 - 4871340-4871595,4871916-4872571 27 9.5
>05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447
Length = 607
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 141 FCKMTSCCTCEGHHSGAKSSLPLVCLVPRD 230
FCK SCC C SL LVC D
Sbjct: 68 FCKRCSCCICHQFDDNKDPSLWLVCASEND 97
>10_08_0746 - 20266701-20266709,20266935-20267063,20267791-20268582
Length = 309
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = +3
Query: 198 SLPLVCLVPRDGASSEARTKPRPASAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRR 377
SLPL L PR S A + A +T + + E + N R L Y +
Sbjct: 204 SLPLRVLSPRSAKGSLAAASSSASPARRSTSSSYASAAEYWCHGNADTAVRDAIL--YCK 261
Query: 378 PLITF--PMTQEDCKHFNLARKYKINQQILDGYL 473
IT P+ H + + +N Q+ D YL
Sbjct: 262 KSITSEGPLKWMQFSHLGTVQMFSLNYQLSDDYL 295
>03_03_0206 +
15447054-15447181,15448243-15448298,15448373-15448515,
15448630-15448827,15448901-15449100,15449585-15449684,
15449769-15450350,15450434-15450556,15451028-15451108,
15451188-15451495,15451577-15451816,15452261-15452345,
15452429-15452606,15453053-15453227,15453826-15453982
Length = 917
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 449 PTNIGRLLGSRRINICAERFPIYE 520
PT++GRL R+N+C+E IY+
Sbjct: 32 PTDVGRLACVSRLNLCSENDEIYQ 55
>01_01_1215 +
9815918-9816218,9816772-9816912,9816988-9817106,
9817922-9818191,9818330-9818369,9818519-9818616,
9818745-9818825
Length = 349
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 228 DGASSEARTKPRPASAGPTTQND 296
+GASSE T+PRP A P T +
Sbjct: 43 EGASSEPETRPRPPPATPATAEE 65
>08_01_0764 -
7332969-7333870,7334044-7334369,7334712-7335384,
7336195-7336219
Length = 641
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 141 FCKMTSCCTCEGHHSGAKSSLPLVC 215
+CK SCC C + SL LVC
Sbjct: 155 YCKRCSCCICHKYDENKDPSLWLVC 179
>11_01_0177 + 1406725-1406920,1407444-1408267
Length = 339
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +3
Query: 174 GHHSGAKSSLPLVCLV-PRDGASSEARTK---PRPASAGPTTQNDFQLLDEEYIRKNFKL 341
G +G S L+ + P+ G ++AR G T +DFQL+D I F L
Sbjct: 144 GQDNGVDSDNSLIPMPGPKRGIGNQARVLIEFDMKIKNGETRDDDFQLIDGAIICSEFVL 203
Query: 342 PQR 350
P R
Sbjct: 204 PNR 206
>12_02_0616 -
21246374-21246462,21246605-21247702,21247800-21248110,
21248550-21249251,21252802-21252912,21253396-21253481,
21253753-21253862,21254085-21254236,21254656-21254765
Length = 922
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 141 FCKMTSCCTCEGHHSGAKSSLPLVC 215
FCK SCC C SL LVC
Sbjct: 347 FCKRCSCCICHLFDDNKDPSLWLVC 371
>01_01_0376 + 2926426-2927040,2927150-2927239,2927674-2927892
Length = 307
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 445 ILYFLAKLKCLQSSCVIGKVIRGRLYGSKYNAL 347
++ FLA L CL S +I + + R+ GS N L
Sbjct: 28 VVEFLASLLCLPMSTIINLLTKERMVGSMGNVL 60
>09_02_0363 -
7871730-7871853,7871986-7872075,7872720-7872799,
7872881-7872964,7874944-7874992,7875114-7875240,
7875798-7875934,7876004-7876050,7876126-7876185,
7876810-7876862,7878205-7878269,7879050-7879174,
7879307-7879366,7879670-7879806,7880737-7880805,
7880889-7881045,7881121-7881235,7881855-7881916
Length = 546
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 298 SSCSTRSTSGKTLSCHRGRCIWTRIDVPL 384
++CS G TL G+C W +I + L
Sbjct: 121 NNCSGNHVEGSTLQKLEGKCFWGKIPIDL 149
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 100 LFCLCFYHFFVCFNLFKFCTKN 35
LF LCF+ F + FN TKN
Sbjct: 97 LFVLCFFLFQIAFNCLLITTKN 118
>07_01_0314 - 2219664-2221091
Length = 475
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 252 TKPRPASAGPTTQNDFQLLDEEYIRKN--FKLPQRALYL 362
++PRP P T D LL +YI+K F+ P L+L
Sbjct: 25 SRPRPRERIPLTTWDVSLLAADYIQKGLLFRPPPATLHL 63
>12_01_0178 + 1316730-1316949,1317781-1318655
Length = 364
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +3
Query: 174 GHHSGAKSSLPLVCLV-PRDGASSEARTK---PRPASAGPTTQNDFQLLDEEYIRKNFKL 341
G +G S L+ + P+ G ++ R G T +DFQL+D I F L
Sbjct: 152 GQDNGVDSDNSLIPMSGPKRGIGNQVRVLIEFDMKIKNGETQDDDFQLIDGAIICSEFVL 211
Query: 342 PQR 350
P R
Sbjct: 212 PDR 214
>06_01_0020 + 212055-213440
Length = 461
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 258 PRPASAGPTTQNDFQLLDEEYIRKNFKLP 344
PRP + P T D +L +YI+K P
Sbjct: 21 PRPRESIPLTSWDLSMLSADYIQKGLVFP 49
>01_01_0643 - 4871340-4871595,4871916-4872571
Length = 303
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 324 RKNFKLPQRALYLDPYRR 377
R+ FKLP A Y+D Y+R
Sbjct: 266 RRTFKLPNPAYYIDNYKR 283
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,945,290
Number of Sequences: 37544
Number of extensions: 324463
Number of successful extensions: 901
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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