Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21b10
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr...    34   0.077
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z77655-6|CAB01139.1|  351|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U75587-1|AAB48299.1|  351|Caenorhabditis elegans caveolin-2 prot...    28   5.1  
Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z71265-3|CAA95835.2|  403|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z78416-3|CAB01680.2|  631|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z46996-9|CAA87097.2|  400|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U50067-5|AAY86219.1|  306|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical ...    27   8.9  
AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical ...    27   8.9  

>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
            F21C10.7 protein.
          Length = 2541

 Score = 33.9 bits (74), Expect = 0.077
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = +3

Query: 279  PPDYNPNSARSDRQEPKIIRRNIWNQEYEKGIASTTH-FGLGRPK----WRPADIPTKQY 443
            PP   P   R+  Q P +I+  + N  +++G  +T   F  G PK    W+  D P +  
Sbjct: 1325 PPPQTPPKPRTPIQRPPVIQPALTNTTWQEGETATLQVFSYGEPKPRVHWKFNDSPVQTS 1384

Query: 444  VRVQVKNE 467
             +VQ+  +
Sbjct: 1385 SQVQISEQ 1392


>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
           protein F28H6.4 protein.
          Length = 1000

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 18/77 (23%), Positives = 34/77 (44%)
 Frame = +3

Query: 282 PDYNPNSARSDRQEPKIIRRNIWNQEYEKGIASTTHFGLGRPKWRPADIPTKQYVRVQVK 461
           P  NP ++    Q   + +    N +  + + + T  GL  PK  PA+   K     ++K
Sbjct: 619 PSENPGTSAQSPQSVNVAKVQSRNMKKPQSVPTATDIGLKEPKPEPAETLEK-----EIK 673

Query: 462 NENPHMRIHNVLEWTVL 512
            EN    + + ++ TV+
Sbjct: 674 PENVAENMRSPVKRTVI 690


>Z77655-6|CAB01139.1|  351|Caenorhabditis elegans Hypothetical
           protein C56A3.7 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = -1

Query: 152 FKV*HLLRVHNYRVLYVNIIDILKFIPELKIILHALLNVFGF 27
           FK+  ++R+++Y++L +    I+ F+  +   L A LN++ F
Sbjct: 249 FKIFEIVRIYSYKILTLIFGLIIAFLGGILFALFAFLNIWIF 290


>U75587-1|AAB48299.1|  351|Caenorhabditis elegans caveolin-2
           protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = -1

Query: 152 FKV*HLLRVHNYRVLYVNIIDILKFIPELKIILHALLNVFGF 27
           FK+  ++R+++Y++L +    I+ F+  +   L A LN++ F
Sbjct: 249 FKIFEIVRIYSYKILTLIFGLIIAFLGGILFALFAFLNIWIF 290


>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 159 TVLPDYMRTEIIIPVSKDTFFNTKWKTVVAP 251
           T+ P  M+T +  P  + T   T  KT VAP
Sbjct: 10  TIAPSTMKTTVAPPTMRTTMAPTTMKTTVAP 40


>Z71265-3|CAA95835.2|  403|Caenorhabditis elegans Hypothetical
           protein M05B5.3 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 320 RTEDHQKEYLESRV*-ERDSIDNTLRPRTTQMETS*YTH*AICSSTS 457
           R  DH++   E+RV  E D+  N   P +T  ETS  T   + SSTS
Sbjct: 204 RGNDHEQASSETRVSIESDAPPNPAPPPSTTPETSSTTPSTVTSSTS 250


>Z78416-3|CAB01680.2|  631|Caenorhabditis elegans Hypothetical
           protein C23H4.3 protein.
          Length = 631

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 360 YEKGIASTTHFGLGRPKWRPADIPTKQYVRVQVKNE 467
           Y K + + T  G+  P+W P D     Y+ ++V ++
Sbjct: 461 YSKLLVNFTKMGVPSPEWAPLDPERMNYLELKVDSD 496


>Z46996-9|CAA87097.2|  400|Caenorhabditis elegans Hypothetical
           protein C34C12.6 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 333 IRRNIWNQEYEKGIASTTHFGLGRPKWRPADI-PTKQYV-RVQVKN 464
           +RR I + +Y K        G+ RPK    D+ P +++V ++QV N
Sbjct: 280 VRRKITSADYYKPYQHYKEHGIDRPKSSHKDVSPAEKFVFKIQVPN 325


>U50067-5|AAY86219.1|  306|Caenorhabditis elegans Hypothetical
           protein C18F3.4 protein.
          Length = 306

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
 Frame = +3

Query: 288 YNPNSARSDRQEPKIIRRNIWNQEYEKGIASTTHFGLG---RPKWRPADIPTKQYVRVQV 458
           Y+P    S    P   R   W +EY K +   +H+      R   +  D+  KQ +R   
Sbjct: 190 YHPYGGNSKNDSPLQTRMKGWQREYIKEVIKDSHYPTEEELRDIEQKCDLSRKQILRFIA 249

Query: 459 KN-ENPHMR 482
           K   NP+ +
Sbjct: 250 KRLTNPNRK 258


>AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical
           protein F27B3.5 protein.
          Length = 787

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -1

Query: 494 HVVDSHVRILIFNLYSNILLSGYISWSPFGSSEAEVCCRCYPFLILLIPNIPSDDLR 324
           HV+D +++IL+  L   +    +I+   F   E E+C     F      NIP  D+R
Sbjct: 191 HVLDDYIKILVSQLEPFLKSQCFITTDAFQKIEQEMCNYWKKF-----ENIPVKDIR 242


>AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical
           protein C09E7.7 protein.
          Length = 995

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -1

Query: 494 HVVDSHVRILIFNLYSNILLSGYISWSPFGSSEAEVCCRCYPFLILLIPNIPSDDLR 324
           HV+D +++IL+  L   +    +I+   F   E E+C     F      NIP  D+R
Sbjct: 398 HVLDDYIKILVSQLEPFLKSQCFITTDAFQKIEQEMCNYWKKF-----ENIPVKDIR 449


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,381,235
Number of Sequences: 27780
Number of extensions: 295268
Number of successful extensions: 777
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)