Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21b07
(600 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0305 - 42631214-42631330,42631423-42631527,42633208-426332... 34 0.076
01_04_0051 + 15430980-15431591 32 0.40
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 31 0.93
09_06_0175 + 21350528-21351136 30 1.2
10_08_0704 - 20018477-20018542,20018693-20018704,20018731-200189... 30 1.6
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 30 1.6
09_02_0283 + 6819086-6820270 30 1.6
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 2.2
06_03_0138 + 17093196-17093325,17095704-17095804,17096224-170962... 29 2.2
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 29 2.8
02_05_1245 + 35223504-35224778 29 2.8
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 29 3.8
11_03_0146 + 10744403-10744603,10745199-10745834,10745967-107461... 28 5.0
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 28 5.0
01_03_0074 + 12215414-12215603,12216178-12216236,12216605-122167... 28 6.6
10_08_0330 - 16816497-16819952 27 8.7
10_01_0324 + 3566638-3566859,3566959-3567223,3567881-3568161 27 8.7
07_03_1226 - 24998276-24998375,24998728-24998849,24998936-249997... 27 8.7
02_04_0631 - 24611729-24612183,24612467-24612629,24612649-24612870 27 8.7
01_06_1612 - 38635703-38636215,38638725-38638967 27 8.7
01_06_0509 - 29921224-29924589 27 8.7
01_06_0058 - 26056334-26056630,26057063-26057365,26057748-260578... 27 8.7
01_05_0427 + 22057201-22057478,22057601-22057793 27 8.7
>01_07_0305 -
42631214-42631330,42631423-42631527,42633208-42633216,
42635198-42636142,42636349-42636450,42637210-42637302
Length = 456
Score = 34.3 bits (75), Expect = 0.076
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 332 SVNPAVKSRPGWLNRATRFNFHVPLRRVGR-VFARCDVPAARVNRPVTVPIPRGLPGR 502
S+ A+ R GW R R H P R+GR ARC R RP +P+ P R
Sbjct: 299 SICAALWRRRGWRQRGRRSPAHPPWLRMGRGGGARCSRRRGRSRRPPPLPLSSFFPAR 356
>01_04_0051 + 15430980-15431591
Length = 203
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = -3
Query: 598 ARRSGRMRALATRPAASQ----GAPRPPTWLSGYRVAAGQ 491
ARR RAL RPA + G+PR P WL + AA Q
Sbjct: 102 ARRDAHRRALRRRPALLRRIELGSPRTPPWLPPHWAAAAQ 141
>03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 247 WLVT*KKLSFYFEKLILLNLYSS 179
WL+ K LSFY E+L LL+LY S
Sbjct: 1676 WLMYPKTLSFYMEELKLLSLYGS 1698
>09_06_0175 + 21350528-21351136
Length = 202
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = -3
Query: 598 ARRSGRMRALATRPAASQGAPRPPTWLSGYRVAAGQATGDRDGHRTVHARRGHIAPRKHA 419
+RR GR RPA + AP L G G R R V RRG P H
Sbjct: 13 SRRPGRNALPTNRPARAAEAPSVVVLLPG-------GVGARGARRCVRPRRGARPPPLHH 65
Query: 418 SHTPKRHMK 392
P+R +
Sbjct: 66 QQPPRRRRR 74
>10_08_0704 -
20018477-20018542,20018693-20018704,20018731-20018927,
20018928-20018999,20019159-20021289
Length = 825
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 537 GAPCDAAGRVASARIRPLR 593
G CDAAG VAS R+R LR
Sbjct: 68 GVACDAAGSVASLRLRSLR 86
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = -3
Query: 589 SGRMRALATRPAASQGAPRPPTWLSGYRVAAGQATG--DRDGHRTV--HARRGHIAPRKH 422
+GR A S W + R G + G R GHR H R G +PR +
Sbjct: 274 NGRSAGSNHNAAGSGDGSNRNLWNNNGRNGGGSSNGFVGRGGHRNRRDHERGGSFSPRNY 333
Query: 421 ASHTP 407
HTP
Sbjct: 334 PRHTP 338
>09_02_0283 + 6819086-6820270
Length = 394
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -3
Query: 592 RSGRMRALATRPAASQGAPRPPTWLSGYRVAAGQATGDR 476
RSG A+ T P A GA PP S R+ G A+GDR
Sbjct: 69 RSGAWLAVPTAPPARHGATSPPQPHSHVRLMRG-ASGDR 106
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 571 LATRPAASQGAPRPPTWLSGYRVAAGQATGDRDGHRTV 458
L +PA P P+ SG R AA + G +G+RT+
Sbjct: 68 LKEKPAGQGSTPSTPSSSSGMRSAAARLLGSGNGNRTL 105
>06_03_0138 +
17093196-17093325,17095704-17095804,17096224-17096292,
17096403-17097650,17097763-17097871,17099459-17099655,
17099732-17099842,17099927-17100079
Length = 705
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 332 SVNPAVKSRPGWLNRATRFNFHVPLRRVGRVFARCD--VPAARVNRPVTVPIPRGLPGRH 505
SVNP V + ++++ + PL V D VP+A N+P+ +P+P LP
Sbjct: 329 SVNPPVSTIESTMSQSQGIS---PLMNNKPVSLPLDSTVPSASSNKPMNIPVPTYLPSSQ 385
Query: 506 P 508
P
Sbjct: 386 P 386
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 595 RRSGRMRALATRPAASQGAPRPPT-WLSGYRVAAGQATGDRDGHRTVHARRGHIAPRKHA 419
R R R+ R + S G PP+ W S + RDG + R H +P
Sbjct: 156 RGYSRSRSPRRRRSPSYGKSGPPSHWGSHGADREERLHSRRDGRGYSRSPRRHDSPSNQR 215
Query: 418 SHTPKRH 398
+H+P+R+
Sbjct: 216 NHSPRRY 222
>02_05_1245 + 35223504-35224778
Length = 424
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 499 AGQATGDRDGHRTVHARRGHIAPRKHASHTPKRHMKI 389
AG+ GDR G R + RG++AP A P R +
Sbjct: 268 AGELLGDRRGRR-IEGTRGYMAPELIAGAAPSRRSDV 303
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 401 PLRRVGRVFARCDVPAARVN-RPVTVPIPRGLP 496
PLRR GR+F C VPAA + R V G P
Sbjct: 40 PLRRRGRLFLACRVPAAAPSARGVAAEAAAGRP 72
>11_03_0146 + 10744403-10744603,10745199-10745834,10745967-10746125,
10746398-10747036,10748018-10748151,10748281-10748464,
10748882-10749217,10751659-10751945,10752863-10753253,
10753351-10753615,10753740-10753818,10754123-10754543
Length = 1243
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 516 QGTGWRPGKPRGIGTVTGRFTRAAGTSHRANTRPTRRS 403
+G G R G+PRG G GR T A A R TRRS
Sbjct: 1162 RGKGKR-GRPRGSGRGRGRGTNAGCKVSTAVPRTTRRS 1198
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 296 FNHLHRYHKFIRSVNPAVKSRP 361
FNH HRY++F RS +P P
Sbjct: 139 FNHDHRYNRFQRSESPVAPPLP 160
>01_03_0074 +
12215414-12215603,12216178-12216236,12216605-12216703,
12216820-12216946,12216989-12217252,12217382-12217503,
12217575-12217646
Length = 310
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 290 YNFNHLHRYHKFIRSVNPAVKSRPGWLNRATRFNFHVPLRRVG 418
+ ++H +HK I ++ P+ RP LN A FN +P + G
Sbjct: 183 HGLRNMHHHHKNIINMEPSNVLRPPNLNNAKGFN--MPFNKEG 223
>10_08_0330 - 16816497-16819952
Length = 1151
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 537 GAPCDAAGRVASARIR 584
G CDAAGRV S R+R
Sbjct: 59 GVACDAAGRVTSLRLR 74
>10_01_0324 + 3566638-3566859,3566959-3567223,3567881-3568161
Length = 255
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -1
Query: 516 QGTGWRPGKPRGIGTVTGRFTRAAGTSHRANTRPTRRS 403
+G G R G+PRG GR T A RPTRRS
Sbjct: 174 RGKGKR-GRPRGSSRGRGRGTNVGCKVSTAVPRPTRRS 210
>07_03_1226 -
24998276-24998375,24998728-24998849,24998936-24999702,
25000447-25000618
Length = 386
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 547 QGAPRPPTWLSGYRVAAGQA-TGDRDGHRTVHA 452
+GAPRPP+WL+ R++ G+ T +G R V A
Sbjct: 42 EGAPRPPSWLA-RRLSGGRTITLLIEGRRVVGA 73
>02_04_0631 - 24611729-24612183,24612467-24612629,24612649-24612870
Length = 279
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 513 GTGWRPGKPRGIGTVT 466
G WRP + RG+G VT
Sbjct: 95 GVAWRPARQRGVGCVT 110
>01_06_1612 - 38635703-38636215,38638725-38638967
Length = 251
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -3
Query: 583 RMRALATRPAASQGAPRPPTWLSGYRVAAGQATGDRDGHRTVHARRGHIAP 431
R +ALA ++ P PPT L V G G G T A RG P
Sbjct: 100 RKKALAMEAMSAFAPPPPPTQLMVPVVGYGGGGGGGAGEGTTTAVRGSYGP 150
>01_06_0509 - 29921224-29924589
Length = 1121
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 203 QFFKIKRQFLLCYQPASHISDCSTVRLLKYNFNHL 307
Q+ + ++ P +SDC +++L +FNHL
Sbjct: 223 QYLDLSGNLIVGEVPGGALSDCRGLKVLNLSFNHL 257
>01_06_0058 -
26056334-26056630,26057063-26057365,26057748-26057891,
26057947-26058702,26058844-26059088,26059177-26060079,
26060163-26060225,26060537-26061025,26061211-26061291,
26061801-26061956,26062371-26062416
Length = 1160
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 230 LLCYQPASHISDCSTVRLLKYNFNHLHRYH-KFIRSVNPAVKS 355
L Y ++ CS+++ +KY F +L++ H K S+N A K+
Sbjct: 836 LRMYNCHMNVEICSSIKAVKYLFKYLYKGHDKASISINEADKN 878
>01_05_0427 + 22057201-22057478,22057601-22057793
Length = 156
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 514 GYRVAAGQATGDRDG-HRTVHARRGHIAPRKHASHTPKRH 398
G +V A G D H VHA +AP+ H H P H
Sbjct: 51 GRQVWADTRYGVADAEHERVHAETFALAPQPHQQHRPADH 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,062,210
Number of Sequences: 37544
Number of extensions: 255282
Number of successful extensions: 1114
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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