Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21b07
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY533306-1|AAS21308.1|  383|Caenorhabditis elegans BRE-4 protein.      31   0.83 
AY130767-1|AAM95168.1|  383|Caenorhabditis elegans UDPGalNAc:Glc...    31   0.83 
AC025727-7|AAG23384.1|  383|Caenorhabditis elegans Bt (bacillus ...    31   0.83 
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    28   5.9  
AF047657-1|AAK18951.1|  328|Caenorhabditis elegans Serpentine re...    27   7.7  

>AY533306-1|AAS21308.1|  383|Caenorhabditis elegans BRE-4 protein.
          Length = 383

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +3

Query: 507 LYPDNHVGGLGAPCDAAGRVASARIRPLR 593
           +YPD H GG G P D   R   A I P R
Sbjct: 129 IYPDTHAGGHGMPKDCVARHRVAIIVPYR 157


>AY130767-1|AAM95168.1|  383|Caenorhabditis elegans
           UDPGalNAc:GlcNAc{beta}-R
           {beta}1,4-N-acetylgalactosaminyltransferase protein.
          Length = 383

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +3

Query: 507 LYPDNHVGGLGAPCDAAGRVASARIRPLR 593
           +YPD H GG G P D   R   A I P R
Sbjct: 129 IYPDTHAGGHGMPKDCVARHRVAIIVPYR 157


>AC025727-7|AAG23384.1|  383|Caenorhabditis elegans Bt (bacillus
           thuringiensis) toxinresistant protein 4 protein.
          Length = 383

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +3

Query: 507 LYPDNHVGGLGAPCDAAGRVASARIRPLR 593
           +YPD H GG G P D   R   A I P R
Sbjct: 129 IYPDTHAGGHGMPKDCVARHRVAIIVPYR 157


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
            F57F4.4 protein.
          Length = 2090

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 434  CDVPAARVNRPVTVPIPRGLP 496
            C+V  A VN   T+P+P G+P
Sbjct: 1947 CNVKEAAVNTTNTIPVPTGIP 1967


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 434  CDVPAARVNRPVTVPIPRGLP 496
            C+V  A VN   T+P+P G+P
Sbjct: 1947 CNVKEAAVNTTNTIPVPTGIP 1967


>AF047657-1|AAK18951.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein54 protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 356 RPGWLNRATRFNFHVPLRRVGRVFA 430
           R GW + A+ FNFH+   R+  V A
Sbjct: 77  RYGWFSEASEFNFHMLSSRISLVAA 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,736,917
Number of Sequences: 27780
Number of extensions: 208254
Number of successful extensions: 531
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)