Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21b04
         (290 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027845-1|BAB55408.1|  426|Homo sapiens protein ( Homo sapiens ...    29   2.7  
AC006539-3|AAD14472.1|  498|Homo sapiens BC39498_1 protein.            29   2.7  
AC006539-2|AAD14470.1|  445|Homo sapiens BC39498_2 protein.            29   2.7  
AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein FL...    27   8.3  
AB028978-1|BAA83007.1|  868|Homo sapiens KIAA1055 protein protein.     27   8.3  

>AK027845-1|BAB55408.1|  426|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14939 fis, clone PLACE1010702, moderately
           similar to ZINC FINGER PROTEIN 43. ).
          Length = 426

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 146 CSGKKIAGNFFGKGNQKLTLSMFSYAKCLKIYSKNFVLIKDSLRY 280
           C  +K   N   +    L   +F Y KC+K++SK+  L ++++R+
Sbjct: 47  CKDQKEIYNGLNQCLSTLPSKIFPYNKCVKVFSKSSNLNRENIRH 91


>AC006539-3|AAD14472.1|  498|Homo sapiens BC39498_1 protein.
          Length = 498

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 146 CSGKKIAGNFFGKGNQKLTLSMFSYAKCLKIYSKNFVLIKDSLRY 280
           C  +K   N   +    L   +F Y KC+K++SK+  L ++++R+
Sbjct: 123 CKDQKEIYNGLNQCLSTLPSKIFPYNKCVKVFSKSSNLNRENIRH 167


>AC006539-2|AAD14470.1|  445|Homo sapiens BC39498_2 protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 146 CSGKKIAGNFFGKGNQKLTLSMFSYAKCLKIYSKNFVLIKDSLRY 280
           C  +K   N   +    L   +F Y KC+K++SK+  L ++++R+
Sbjct: 70  CKDQKEIYNGLNQCLSTLPSKIFPYNKCVKVFSKSSNLNRENIRH 114


>AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein
           FLJ32110 protein.
          Length = 1349

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 19  CLLRPCGNGPFRTREKNT 72
           CLL+ C +GP  T E NT
Sbjct: 898 CLLKNCSSGPSETTESNT 915


>AB028978-1|BAA83007.1|  868|Homo sapiens KIAA1055 protein protein.
          Length = 868

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 27  KALRQRTFSDQRKKYFSSSRGFPRGPKLSRLQFRAQSNRYV--LEKRLQEISLERE 188
           + L+Q   S Q  KYF+SSR     PK   L+   Q +  +  L  +L+  SLE+E
Sbjct: 320 RLLQQTVRSSQYDKYFTSSRLCEGVPK-DTLELLHQKDDQILGLTSQLERFSLEKE 374


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,679,720
Number of Sequences: 237096
Number of extensions: 730220
Number of successful extensions: 1691
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1691
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)