Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21a19
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein. 34 0.53
AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coacti... 34 0.53
AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coacti... 34 0.53
AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactiv... 34 0.53
AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified transc... 34 0.53
AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone recepto... 34 0.53
AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coacti... 34 0.53
AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associate... 31 2.8
AK127504-1|BAC87010.1| 862|Homo sapiens protein ( Homo sapiens ... 31 2.8
BC022534-1|AAH22534.1| 132|Homo sapiens chromosome 4 open readi... 31 3.7
BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix... 31 4.9
BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix... 31 4.9
BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix... 31 4.9
BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix... 31 4.9
AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein. 31 4.9
M59964-1|AAA85450.1| 273|Homo sapiens stem cell factor protein. 30 8.6
BC126166-1|AAI26167.1| 273|Homo sapiens KIT ligand protein. 30 8.6
BC074725-1|AAH74725.1| 273|Homo sapiens KIT ligand protein. 30 8.6
BC069797-1|AAH69797.1| 273|Homo sapiens KIT ligand, isoform b p... 30 8.6
BC069783-1|AAH69783.1| 273|Homo sapiens KIT ligand protein. 30 8.6
BC069733-1|AAH69733.1| 273|Homo sapiens KIT ligand protein. 30 8.6
AF400436-1|AAK92485.1| 273|Homo sapiens stem cell factor isofor... 30 8.6
AB199796-1|BAF43710.1| 675|Homo sapiens hypothetical protein pr... 30 8.6
>D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein.
Length = 2079
Score = 33.9 bits (74), Expect = 0.53
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHD---YEAENTLNAEIDKNAKNSPDTSTKS 506
+VP ED S++ G SDPN +P+ L EA +L+ +D + +P+ + K
Sbjct: 1468 VVP--EDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSG--APNVTIKP 1523
Query: 507 ANTLPL----PVIAGFDAKVLRDIGLSDCSKNCKERILSLNRDQTNKRSTSL 650
L PV++G D K I + KE SLN +N+ +SL
Sbjct: 1524 PGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSL 1575
>AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coactivator
6 protein.
Length = 2063
Score = 33.9 bits (74), Expect = 0.53
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHD---YEAENTLNAEIDKNAKNSPDTSTKS 506
+VP ED S++ G SDPN +P+ L EA +L+ +D + +P+ + K
Sbjct: 1452 VVP--EDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSG--APNVTIKP 1507
Query: 507 ANTLPL----PVIAGFDAKVLRDIGLSDCSKNCKERILSLNRDQTNKRSTSL 650
L PV++G D K I + KE SLN +N+ +SL
Sbjct: 1508 PGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSL 1559
>AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coactivator
protein.
Length = 2063
Score = 33.9 bits (74), Expect = 0.53
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHD---YEAENTLNAEIDKNAKNSPDTSTKS 506
+VP ED S++ G SDPN +P+ L EA +L+ +D + +P+ + K
Sbjct: 1452 VVP--EDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSG--APNVTIKP 1507
Query: 507 ANTLPL----PVIAGFDAKVLRDIGLSDCSKNCKERILSLNRDQTNKRSTSL 650
L PV++G D K I + KE SLN +N+ +SL
Sbjct: 1508 PGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSL 1559
>AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactivator
AIB3 protein.
Length = 2001
Score = 33.9 bits (74), Expect = 0.53
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHD---YEAENTLNAEIDKNAKNSPDTSTKS 506
+VP ED S++ G SDPN +P+ L EA +L+ +D + +P+ + K
Sbjct: 1390 VVP--EDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSG--APNVTIKP 1445
Query: 507 ANTLPL----PVIAGFDAKVLRDIGLSDCSKNCKERILSLNRDQTNKRSTSL 650
L PV++G D K I + KE SLN +N+ +SL
Sbjct: 1446 PGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSL 1497
>AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified
transcriptional coactivator ASC-2 protein.
Length = 2063
Score = 33.9 bits (74), Expect = 0.53
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHD---YEAENTLNAEIDKNAKNSPDTSTKS 506
+VP ED S++ G SDPN +P+ L EA +L+ +D + +P+ + K
Sbjct: 1452 VVP--EDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSG--APNVTIKP 1507
Query: 507 ANTLPL----PVIAGFDAKVLRDIGLSDCSKNCKERILSLNRDQTNKRSTSL 650
L PV++G D K I + KE SLN +N+ +SL
Sbjct: 1508 PGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSL 1559
>AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone receptor
binding protein protein.
Length = 2063
Score = 33.9 bits (74), Expect = 0.53
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHD---YEAENTLNAEIDKNAKNSPDTSTKS 506
+VP ED S++ G SDPN +P+ L EA +L+ +D + +P+ + K
Sbjct: 1452 VVP--EDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSG--APNVTIKP 1507
Query: 507 ANTLPL----PVIAGFDAKVLRDIGLSDCSKNCKERILSLNRDQTNKRSTSL 650
L PV++G D K I + KE SLN +N+ +SL
Sbjct: 1508 PGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSL 1559
>AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coactivator
RAP250 protein.
Length = 2063
Score = 33.9 bits (74), Expect = 0.53
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHD---YEAENTLNAEIDKNAKNSPDTSTKS 506
+VP ED S++ G SDPN +P+ L EA +L+ +D + +P+ + K
Sbjct: 1452 VVP--EDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQLLDNSG--APNVTIKP 1507
Query: 507 ANTLPL----PVIAGFDAKVLRDIGLSDCSKNCKERILSLNRDQTNKRSTSL 650
L PV++G D K I + KE SLN +N+ +SL
Sbjct: 1508 PGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSL 1559
>AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associated
antigen SGA-72M protein.
Length = 1780
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 414 ETVLHDYEAENTLNAEIDKNAKNSPDTSTKSANTLPLPVIAGFDAKV 554
+TV+H N+L A +DK K + TS PVI G ++K+
Sbjct: 754 KTVVHPKVKRNSLTASLDKLLKEATGTSPSPLQAKLAPVITGTNSKL 800
>AK127504-1|BAC87010.1| 862|Homo sapiens protein ( Homo sapiens
cDNA FLJ45597 fis, clone BRTHA3018409, weakly similar
to Mus musculus synaptotagmin-like 4 (Sytl4). ).
Length = 862
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 414 ETVLHDYEAENTLNAEIDKNAKNSPDTSTKSANTLPLPVIAGFDAKV 554
+TV+H N+L A +DK K + TS PVI G ++K+
Sbjct: 230 KTVVHPKVKRNSLTASLDKLLKEATGTSPSPLQAKLAPVITGTNSKL 276
>BC022534-1|AAH22534.1| 132|Homo sapiens chromosome 4 open reading
frame 32 protein.
Length = 132
Score = 31.1 bits (67), Expect = 3.7
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 363 RQRGNSSDPNNIPTKTSETVLHDYEAENTLNAEIDKNAKNSPDTSTKSANTLPLPVIAGF 542
RQ+ + D + T E V DY+ TL E++KN N T + PVI F
Sbjct: 45 RQKESEQDVEDSQNHTGEPVGDDYKKMGTLFGELNKNLINMGFTRMYFGERIVEPVIVIF 104
Query: 543 DAKVLRDIGL 572
+L +GL
Sbjct: 105 FWVMLWFLGL 114
>BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 312 QEALSHASIVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLNAEIDKNAKNSPD 491
Q S +SIVP E + + D NIP +T ET L + E+ N E + +
Sbjct: 310 QAERSQSSIVPEEEQAANKGEEKKDDENIPMETEETHLEE-TTESQQNGEEGTSTPEDKE 368
Query: 492 TSTKSANTL 518
+ + +++
Sbjct: 369 SGQEGVDSM 377
>BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 312 QEALSHASIVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLNAEIDKNAKNSPD 491
Q S +SIVP E + + D NIP +T ET L + E+ N E + +
Sbjct: 310 QAERSQSSIVPEEEQAANKGEEKKDDENIPMETEETHLEE-TTESQQNGEEGTSTPEDKE 368
Query: 492 TSTKSANTL 518
+ + +++
Sbjct: 369 SGQEGVDSM 377
>BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 312 QEALSHASIVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLNAEIDKNAKNSPD 491
Q S +SIVP E + + D NIP +T ET L + E+ N E + +
Sbjct: 310 QAERSQSSIVPEEEQAANKGEEKKDDENIPMETEETHLEE-TTESQQNGEEGTSTPEDKE 368
Query: 492 TSTKSANTL 518
+ + +++
Sbjct: 369 SGQEGVDSM 377
>BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 312 QEALSHASIVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLNAEIDKNAKNSPD 491
Q S +SIVP E + + D NIP +T ET L + E+ N E + +
Sbjct: 310 QAERSQSSIVPEEEQAANKGEEKKDDENIPMETEETHLEE-TTESQQNGEEGTSTPEDKE 368
Query: 492 TSTKSANTL 518
+ + +++
Sbjct: 369 SGQEGVDSM 377
>AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 312 QEALSHASIVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLNAEIDKNAKNSPD 491
Q S +SIVP E + + D NIP +T ET L + E+ N E + +
Sbjct: 310 QAERSQSSIVPEEEQAANKGEEKKDDENIPMETEETHLEE-TTESQQNGEEGTSTPEDKE 368
Query: 492 TSTKSANTL 518
+ + +++
Sbjct: 369 SGQEGVDSM 377
>M59964-1|AAA85450.1| 273|Homo sapiens stem cell factor protein.
Length = 273
Score = 29.9 bits (64), Expect = 8.6
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +3
Query: 156 SNETLVDQLECYVDDLVECFEDFVKKSLXXXXXXXXXXXXLLVYVLKMVTERQEALSHAS 335
SN +++D+L VDDLVEC ++ K L ++ +A
Sbjct: 96 SNYSIIDKLVNIVDDLVECVKENSSKDLKKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFV 155
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLN--AEIDKNAKNSPDTSTKSA 509
+ D S + ++ + T +L A + N + ++ AKN P S+
Sbjct: 156 VASETSDCVVSSTLSPEKDSRVSVTKPFMLPPVAASSLRNDSSSSNRKAKNPPGDSSLHW 215
Query: 510 NTLPLPVI 533
+ LP +
Sbjct: 216 AAMALPAL 223
>BC126166-1|AAI26167.1| 273|Homo sapiens KIT ligand protein.
Length = 273
Score = 29.9 bits (64), Expect = 8.6
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +3
Query: 156 SNETLVDQLECYVDDLVECFEDFVKKSLXXXXXXXXXXXXLLVYVLKMVTERQEALSHAS 335
SN +++D+L VDDLVEC ++ K L ++ +A
Sbjct: 96 SNYSIIDKLVNIVDDLVECVKENSSKDLKKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFV 155
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLN--AEIDKNAKNSPDTSTKSA 509
+ D S + ++ + T +L A + N + ++ AKN P S+
Sbjct: 156 VASETSDCVVSSTLSPEKDSRVSVTKPFMLPPVAASSLRNDSSSSNRKAKNPPGDSSLHW 215
Query: 510 NTLPLPVI 533
+ LP +
Sbjct: 216 AAMALPAL 223
>BC074725-1|AAH74725.1| 273|Homo sapiens KIT ligand protein.
Length = 273
Score = 29.9 bits (64), Expect = 8.6
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +3
Query: 156 SNETLVDQLECYVDDLVECFEDFVKKSLXXXXXXXXXXXXLLVYVLKMVTERQEALSHAS 335
SN +++D+L VDDLVEC ++ K L ++ +A
Sbjct: 96 SNYSIIDKLVNIVDDLVECVKENSSKDLKKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFV 155
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLN--AEIDKNAKNSPDTSTKSA 509
+ D S + ++ + T +L A + N + ++ AKN P S+
Sbjct: 156 VASETSDCVVSSTLSPEKDSRVSVTKPFMLPPVAASSLRNDSSSSNRKAKNPPGDSSLHW 215
Query: 510 NTLPLPVI 533
+ LP +
Sbjct: 216 AAMALPAL 223
>BC069797-1|AAH69797.1| 273|Homo sapiens KIT ligand, isoform b
precursor protein.
Length = 273
Score = 29.9 bits (64), Expect = 8.6
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +3
Query: 156 SNETLVDQLECYVDDLVECFEDFVKKSLXXXXXXXXXXXXLLVYVLKMVTERQEALSHAS 335
SN +++D+L VDDLVEC ++ K L ++ +A
Sbjct: 96 SNYSIIDKLVNIVDDLVECVKENSSKDLKKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFV 155
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLN--AEIDKNAKNSPDTSTKSA 509
+ D S + ++ + T +L A + N + ++ AKN P S+
Sbjct: 156 VASETSDCVVSSTLSPEKDSRVSVTKPFMLPPVAASSLRNDSSSSNRKAKNPPGDSSLHW 215
Query: 510 NTLPLPVI 533
+ LP +
Sbjct: 216 AAMALPAL 223
>BC069783-1|AAH69783.1| 273|Homo sapiens KIT ligand protein.
Length = 273
Score = 29.9 bits (64), Expect = 8.6
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +3
Query: 156 SNETLVDQLECYVDDLVECFEDFVKKSLXXXXXXXXXXXXLLVYVLKMVTERQEALSHAS 335
SN +++D+L VDDLVEC ++ K L ++ +A
Sbjct: 96 SNYSIIDKLVNIVDDLVECVKENSSKDLKKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFV 155
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLN--AEIDKNAKNSPDTSTKSA 509
+ D S + ++ + T +L A + N + ++ AKN P S+
Sbjct: 156 VASETSDCVVSSTLSPEKDSRVSVTKPFMLPPVAASSLRNDSSSSNRKAKNPPGDSSLHW 215
Query: 510 NTLPLPVI 533
+ LP +
Sbjct: 216 AAMALPAL 223
>BC069733-1|AAH69733.1| 273|Homo sapiens KIT ligand protein.
Length = 273
Score = 29.9 bits (64), Expect = 8.6
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +3
Query: 156 SNETLVDQLECYVDDLVECFEDFVKKSLXXXXXXXXXXXXLLVYVLKMVTERQEALSHAS 335
SN +++D+L VDDLVEC ++ K L ++ +A
Sbjct: 96 SNYSIIDKLVNIVDDLVECVKENSSKDLKKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFV 155
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLN--AEIDKNAKNSPDTSTKSA 509
+ D S + ++ + T +L A + N + ++ AKN P S+
Sbjct: 156 VASETSDCVVSSTLSPEKDSRVSVTKPFMLPPVAASSLRNDSSSSNRKAKNPPGDSSLHW 215
Query: 510 NTLPLPVI 533
+ LP +
Sbjct: 216 AAMALPAL 223
>AF400436-1|AAK92485.1| 273|Homo sapiens stem cell factor isoform 1
protein.
Length = 273
Score = 29.9 bits (64), Expect = 8.6
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +3
Query: 156 SNETLVDQLECYVDDLVECFEDFVKKSLXXXXXXXXXXXXLLVYVLKMVTERQEALSHAS 335
SN +++D+L VDDLVEC ++ K L ++ +A
Sbjct: 96 SNYSIIDKLVNIVDDLVECVKENSSKDLKKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFV 155
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLN--AEIDKNAKNSPDTSTKSA 509
+ D S + ++ + T +L A + N + ++ AKN P S+
Sbjct: 156 VASETSDCVVSSTLSPEKDSRVSVTKPFMLPPVAASSLRNDSSSSNRKAKNPPGDSSLHW 215
Query: 510 NTLPLPVI 533
+ LP +
Sbjct: 216 AAMALPAL 223
>AB199796-1|BAF43710.1| 675|Homo sapiens hypothetical protein
protein.
Length = 675
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +3
Query: 336 IVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLNAEIDKNAKNSPDTSTKSANT 515
+VP+ E++ RQ G + DP + + S ++ N + A A++S + S ++
Sbjct: 569 VVPSAEELRRQAGLNKDPRCLTPEPSPALVPSIPTXNQVIAAYPFVARSSHEVSLQAGQ- 627
Query: 516 LPLPVIAGFDAK 551
P+ ++ D K
Sbjct: 628 -PVTILEAQDKK 638
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,667,521
Number of Sequences: 237096
Number of extensions: 1546767
Number of successful extensions: 3181
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3181
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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