Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21a15
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069297-1|AAH69297.1|  105|Homo sapiens keratin associated prot...    33   1.3  
BC069078-1|AAH69078.1|  105|Homo sapiens keratin associated prot...    33   1.3  
AJ406952-1|CAC27591.1|  105|Homo sapiens keratin associated prot...    33   1.3  

>BC069297-1|AAH69297.1|  105|Homo sapiens keratin associated protein
           17-1 protein.
          Length = 105

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -2

Query: 614 CTGTECWGSSLCGRCTECRWCCGGC 540
           C G+ C GS  CG C  C  C GGC
Sbjct: 52  CCGSSCCGSG-CGGCGGCGGCGGGC 75


>BC069078-1|AAH69078.1|  105|Homo sapiens keratin associated protein
           17-1 protein.
          Length = 105

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -2

Query: 614 CTGTECWGSSLCGRCTECRWCCGGC 540
           C G+ C GS  CG C  C  C GGC
Sbjct: 52  CCGSSCCGSG-CGGCGGCGGCGGGC 75


>AJ406952-1|CAC27591.1|  105|Homo sapiens keratin associated protein
           16.1 protein.
          Length = 105

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -2

Query: 614 CTGTECWGSSLCGRCTECRWCCGGC 540
           C G+ C GS  CG C  C  C GGC
Sbjct: 52  CCGSSCCGSG-CGGCGGCGGCGGGC 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,946,058
Number of Sequences: 237096
Number of extensions: 1747924
Number of successful extensions: 4343
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4321
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)