Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21a15
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 32 0.45
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 32 0.45
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 32 0.45
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 31 1.0
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical... 29 2.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.2
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 29 4.2
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 28 5.5
AC006627-9|AAK85464.1| 367|Caenorhabditis elegans Hypothetical ... 28 7.3
Z81589-7|CAB61028.1| 63|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 9.6
X53245-1|CAA37335.1| 63|Caenorhabditis elegans metallothionein... 27 9.6
M92910-1|AAA28111.1| 63|Caenorhabditis elegans metallothionein... 27 9.6
M32387-1|AAA28118.1| 63|Caenorhabditis elegans protein ( C.ele... 27 9.6
M32386-1|AAA28117.1| 63|Caenorhabditis elegans protein ( C.ele... 27 9.6
D17365-1|BAA04181.1| 63|Caenorhabditis elegans metallothionein... 27 9.6
>U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical
protein T13C2.7 protein.
Length = 292
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 433 HPLEVSLHLLIRQ-LAVLPLGKQQIRMQDRPRICRLVQPPQHHRHSVHLPHKLLPQH-SV 606
HPLEV+L + + LP + + ++RP++C L+ PP R SV + +P H SV
Sbjct: 189 HPLEVNLPNRSKSHIGFLP---EIVVTEERPKLCLLLPPPNRRRKSVTTQNNTIPIHKSV 245
Query: 607 PVQIQVLASGS 639
Q VL+ S
Sbjct: 246 SCQQLVLSRKS 256
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -2
Query: 680 CRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 540
C C C CR P C C + C RC T CR CC GC
Sbjct: 77 CGCCGCGCGCCCCR-PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 680 CRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 540
C C + C C P+ C CT C + C RC T CR CC GC
Sbjct: 66 CGCCCCRPRCCCCCRPK---CCCT---CCRTCCCTRCCTCCRPCCCGC 107
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 680 CRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 540
C C + C C P+ C CT C + C RC T CR CC GC
Sbjct: 69 CGCCCCRPRCCCCCRPK---CCCT---CCRTCCCTRCCTCCRPCCCGC 110
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 463 IRQLAVLPLGKQQIRMQDRPRICRLVQP--PQHHRHSVHLPHKLLPQHSVPVQIQVLASG 636
+R L LPL Q Q P I L+QP PQ+ S+ ++LP+ S+P +L
Sbjct: 322 LRSLPALPLILLQPSRQALPLI--LLQPSLPQNQLRSLPAHPRILPRPSLPALPLILLQP 379
Query: 637 SRHQRQLALVFQH 675
S Q QL + H
Sbjct: 380 SLPQNQLRSLLAH 392
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = -2
Query: 614 CTGTECWGSSLCGRCTECRWC--CGGC 540
C G C CG C C C CGGC
Sbjct: 759 CDGAACGACGACGACGACGGCGGCGGC 785
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 626 KTCI---CTGTECWGSSLCGRCTECRWCCGGCT 537
K C+ CT C +S C RC+ C C CT
Sbjct: 66 KVCVQDDCTTCSCTSASRCSRCSPCCSGCCSCT 98
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 680 CRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 540
C C + K C CR + C C T C C RC T CR CC GC
Sbjct: 85 CCCCRPKCCCC-CR----RCCTCCRTCC-----CTRCCTCCRPCCCGC 122
>AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical
protein Y41C4A.13 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = -2
Query: 347 TKCKTAK---YWCTCCGTSEAECCF 282
TKC T+ YW CCG ECCF
Sbjct: 47 TKCGTSSIFHYW-KCCGELNKECCF 70
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 653 CR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 540
C CR P C C + C RC T CR CC GC
Sbjct: 84 CCCCR-PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 121
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 653 CR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 540
C CR P C C + C RC T CR CC GC
Sbjct: 85 CCCCR-PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 122
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 653 CR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 540
C CR P C C + C RC T CR CC GC
Sbjct: 86 CCCCR-PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -2
Query: 680 CRC*KTKASCR*CRLPEA-KTCICTGTECWGSSLCGRCTECRWCCGGCTKRQ 528
C C + K C CR + C C C G CG C C GG KR+
Sbjct: 74 CCCCRPKCCCTCCRTCCCTRCCTCCRPCCCGCG-CGCGCGCCGCGGGGRKRR 124
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 538 VQPPQHHRHSVHLPHKLLPQHSVPVQIQ 621
V+PP H RHS L L H +P Q+Q
Sbjct: 282 VEPP-HRRHSHRLTRDTLRDHDLPFQLQ 308
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 335 TAKYWCTCCGTSEA-ECCFVFCVGSTK 258
T ++C CCG +CC FC G K
Sbjct: 140 TGGFFCCCCGCMCCCQCCCNFCCGKYK 166
>AC006627-9|AAK85464.1| 367|Caenorhabditis elegans Hypothetical
protein E01A2.7 protein.
Length = 367
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 439 LEVSLHLLIRQLAVLPLGKQQIRMQDRPRICRLVQPPQHHRHSVHLPHKL 588
L VS+H + L L + K+ RP CR ++ P H + + KL
Sbjct: 11 LGVSIHFIFNTLLTLDINKRVYN--HRPGECRKIEGPVHGSEDIEVIDKL 58
>Z81589-7|CAB61028.1| 63|Caenorhabditis elegans Hypothetical
protein T08G5.10 protein.
Length = 63
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 683 RCRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGC 540
+C C SC K C C+ +C C +E + C GC
Sbjct: 4 KCDCKNQNCSCN----TGTKDCDCSDAKCCEQYCCPTASEKKCCKSGC 47
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 544 PPQHHRHSVHLP-HKLLPQHSVPVQ 615
PP+HH H H P H L H P Q
Sbjct: 1611 PPRHHHHQPHPPHHPHLQNHYHPPQ 1635
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 544 PPQHHRHSVHLP-HKLLPQHSVPVQ 615
PP+HH H H P H L H P Q
Sbjct: 1772 PPRHHHHQPHPPHHPHLQNHYHPPQ 1796
>X53245-1|CAA37335.1| 63|Caenorhabditis elegans metallothionein-II
protein.
Length = 63
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 683 RCRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGC 540
+C C SC K C C+ +C C +E + C GC
Sbjct: 4 KCDCKNQNCSCN----TGTKDCDCSDAKCCEQYCCPTASEKKCCKSGC 47
>M92910-1|AAA28111.1| 63|Caenorhabditis elegans metallothionein-2
protein.
Length = 63
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 683 RCRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGC 540
+C C SC K C C+ +C C +E + C GC
Sbjct: 4 KCDCKNQNCSCN----TGTKDCDCSDAKCCEQYCCPTASEKKCCKSGC 47
>M32387-1|AAA28118.1| 63|Caenorhabditis elegans protein (
C.elegans metallothionein-like protein (MT-Ce) mRNA,
clone MTCe-2, complete cds.).
Length = 63
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 683 RCRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGC 540
+C C SC K C C+ +C C +E + C GC
Sbjct: 4 KCDCKNQNCSCN----TGTKDCDCSDAKCCEQYCCPTASEKKCCKSGC 47
>M32386-1|AAA28117.1| 63|Caenorhabditis elegans protein (
C.elegans metallothionein-like protein (MT-Ce) mRNA,
clone MTCe-1, complete cds.).
Length = 63
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 683 RCRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGC 540
+C C SC K C C+ +C C +E + C GC
Sbjct: 4 KCDCKNQNCSCN----TGTKDCDCSDAKCCEQYCCPTASEKKCCKSGC 47
>D17365-1|BAA04181.1| 63|Caenorhabditis elegans metallothionein-II
protein.
Length = 63
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 683 RCRC*KTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGC 540
+C C SC K C C+ +C C +E + C GC
Sbjct: 4 KCDCKNQNCSCN----TGTKDCDCSDAKCCEQYCCPTASEKKCCKSGC 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,391,577
Number of Sequences: 27780
Number of extensions: 262857
Number of successful extensions: 924
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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