Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21a13
         (363 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0650 + 5500662-5501206,5502485-5502563,5503100-5503308,550...    27   3.4  
04_01_0128 + 1398190-1398480,1399245-1399505                           27   4.5  
02_05_0419 - 28814754-28816114,28816749-28817435,28817554-288177...    27   4.5  
08_02_1461 - 27299891-27301870                                         27   6.0  
02_03_0052 - 14456925-14457176,14457277-14457437,14457843-144579...    27   6.0  
01_06_1522 - 37962431-37963060,37963216-37963542                       26   7.9  

>12_01_0650 +
           5500662-5501206,5502485-5502563,5503100-5503308,
           5504396-5505146
          Length = 527

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = +1

Query: 109 YVSGG----RTSCESARVGTTALPISAVKQYC 192
           YV+G     RT C  + VG  + P+ A+K +C
Sbjct: 454 YVNGSERVKRTLCHLSVVGINSFPVEAIKSFC 485


>04_01_0128 + 1398190-1398480,1399245-1399505
          Length = 183

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 204 SNRNAILLHGRNRQGGGTYPRGLTRRPTTT 115
           +  NA   HGR        PR ++ RPTTT
Sbjct: 57  NGNNAEDHHGRQAAAAAVVPRAVSTRPTTT 86


>02_05_0419 -
           28814754-28816114,28816749-28817435,28817554-28817774,
           28818536-28818750
          Length = 827

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 344 LDGRTSSQPTWCKVVTGAHGHLQR 273
           L+GRT  QP WC   TG    +QR
Sbjct: 649 LEGRTGGQPAWC---TGRRTAMQR 669


>08_02_1461 - 27299891-27301870
          Length = 659

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 210 HPSNRNAILLHGRNRQGGGTYPRGL 136
           H ++    LL GR R GGG + RGL
Sbjct: 282 HAADLRKKLLRGRRRGGGGGHRRGL 306


>02_03_0052 -
           14456925-14457176,14457277-14457437,14457843-14457914,
           14458105-14458221,14458310-14458322,14458917-14458946,
           14459837-14460010,14460276-14460417,14460731-14460792,
           14461047-14461643
          Length = 539

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 341 DGRTSSQPTWCKVVTGAHGHLQRKCATH 258
           DGR + +  W K  T  H +LQ  C  H
Sbjct: 498 DGRCNLKKGWAKFATHNHIYLQSLCTFH 525


>01_06_1522 - 37962431-37963060,37963216-37963542
          Length = 318

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 334 GRAHSPPGVKWLLEPMD 284
           G+ H PPG +WL E MD
Sbjct: 46  GQLHLPPGGRWLDEYMD 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,924,435
Number of Sequences: 37544
Number of extensions: 261643
Number of successful extensions: 503
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)