Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21a11
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 238 2e-63
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 238 2e-63
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 238 2e-63
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 224 5e-59
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 224 5e-59
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 224 5e-59
Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical pr... 33 0.25
U80447-8|AAB37812.3| 900|Caenorhabditis elegans Patched related... 29 4.0
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical... 29 4.0
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical p... 27 9.2
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 238 bits (583), Expect = 2e-63
Identities = 112/189 (59%), Positives = 133/189 (70%)
Frame = +1
Query: 109 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 288
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 289 XXXXXXXXXXXXDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDF 468
+ + L A+KFNGGGHINHSIFW NL PS A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 469 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 648
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 649 EHAYYLQYK 675
EHAYYLQYK
Sbjct: 185 EHAYYLQYK 193
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 238 bits (583), Expect = 2e-63
Identities = 112/189 (59%), Positives = 133/189 (70%)
Frame = +1
Query: 109 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 288
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 289 XXXXXXXXXXXXDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDF 468
+ + L A+KFNGGGHINHSIFW NL PS A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 469 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 648
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 649 EHAYYLQYK 675
EHAYYLQYK
Sbjct: 185 EHAYYLQYK 193
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 238 bits (583), Expect = 2e-63
Identities = 112/189 (59%), Positives = 133/189 (70%)
Frame = +1
Query: 109 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 288
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 289 XXXXXXXXXXXXDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDF 468
+ + L A+KFNGGGHINHSIFW NL PS A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 469 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 648
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 649 EHAYYLQYK 675
EHAYYLQYK
Sbjct: 185 EHAYYLQYK 193
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 224 bits (547), Expect = 5e-59
Identities = 107/178 (60%), Positives = 125/178 (70%), Gaps = 2/178 (1%)
Frame = +1
Query: 148 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVXXXXXXXXXXX 321
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 322 XDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDFGSWDNLKNQLS 501
+ + L A+KFNGGGHINHSIFW NL PS +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 502 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYK 675
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYK
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYK 190
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 224 bits (547), Expect = 5e-59
Identities = 107/178 (60%), Positives = 125/178 (70%), Gaps = 2/178 (1%)
Frame = +1
Query: 148 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVXXXXXXXXXXX 321
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 322 XDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDFGSWDNLKNQLS 501
+ + L A+KFNGGGHINHSIFW NL PS +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 502 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYK 675
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYK
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYK 190
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 224 bits (547), Expect = 5e-59
Identities = 107/178 (60%), Positives = 125/178 (70%), Gaps = 2/178 (1%)
Frame = +1
Query: 148 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVXXXXXXXXXXX 321
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 322 XDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDFGSWDNLKNQLS 501
+ + L A+KFNGGGHINHSIFW NL PS +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 502 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYK 675
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYK
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYK 190
>Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical
protein F49H6.2 protein.
Length = 212
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 489 ESTVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIGPALRNRCMGA 653
+ T DS C S G L Q+ + +ANS++ G+S+ WIG CM +
Sbjct: 90 QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSS 143
>U80447-8|AAB37812.3| 900|Caenorhabditis elegans Patched related
family protein 10 protein.
Length = 900
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 346 LLSAIKFNGGGHINHSIFWLNLTPCKTVPSC 438
L A+ ++ +N +FWL P K +PSC
Sbjct: 445 LRPAVTYSSTSPLNVKLFWLGSQPQKPLPSC 475
>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
protein Y47D3A.29 protein.
Length = 1428
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -3
Query: 541 ANPSLSPVLPQKLSTVDSLSYPRIQSLFQQLVKMDRRVLSYTE 413
A+P SPV +K++ V++ + P IQ + ++ VKM+ L E
Sbjct: 237 ASPVTSPVKTEKMAEVEAPTAPAIQKI-EETVKMETEHLEEVE 278
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 492 STVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIG 623
+T +C S G L T+ +A+S E GS+ G WIG
Sbjct: 45 NTAKEYCDSHGYSLATVDNAITSNFLASSAATEFGSNNGQFWIG 88
>Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 249 VMKTHDFTANDRLQCIVLVRKLWQSMLLARSTG 151
++ HD++ N R+ C++ V + W +LL R +G
Sbjct: 556 LVDVHDYSTNQRISCVLGVAQDW-IVLLERPSG 587
>Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 249 VMKTHDFTANDRLQCIVLVRKLWQSMLLARSTG 151
++ HD++ N R+ C++ V + W +LL R +G
Sbjct: 556 LVDVHDYSTNQRISCVLGVAQDW-IVLLERPSG 587
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,497
Number of Sequences: 27780
Number of extensions: 311997
Number of successful extensions: 775
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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