Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21a09
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12964-12|AAA91216.1|  362|Caenorhabditis elegans Hypothetical p...    39   0.003
AF043706-5|ABP57808.1|  536|Caenorhabditis elegans Hypothetical ...    33   0.14 
AF043706-3|ABP57807.1|  534|Caenorhabditis elegans Hypothetical ...    33   0.14 
Z69885-3|CAA93755.1|  278|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z92829-9|CAB07349.1|  360|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006714-10|AAK29727.2|  253|Caenorhabditis elegans F-box a prot...    29   2.9  
U97009-12|ABR92602.1|  532|Caenorhabditis elegans Udp-glucuronos...    28   5.1  
U97009-11|AAC69026.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   5.1  
Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U53336-8|AAA96180.2|  326|Caenorhabditis elegans Aurora/ipl1 rel...    27   8.9  
AF071206-1|AAC70944.1|  326|Caenorhabditis elegans aurora/Ipl1-r...    27   8.9  
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ...    27   8.9  

>U12964-12|AAA91216.1|  362|Caenorhabditis elegans Hypothetical
           protein F26F4.1 protein.
          Length = 362

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 53/201 (26%), Positives = 78/201 (38%), Gaps = 24/201 (11%)
 Frame = +3

Query: 129 LDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQQGSGA-DL 305
           L +L       ++Y+A Q YRT   R    K   E              R++Q   A D+
Sbjct: 6   LSRLSEFEKEKKFYDALQFYRTKVTRSFRLKNANEVAIPLVKHALEFFFREKQYQCAIDI 65

Query: 306 AILFVEVLTKSETKPNEEW-------VSKLAKLFEL---ISSSVPE------RETFLTNS 437
              + E L+K+     EE        VSK A   E+     +S PE      R   +  +
Sbjct: 66  TTQYAECLSKNNVDLGEEAFNILADSVSKFANFAEIENEAGNSEPEQLLNTARCKCVDLA 125

Query: 438 IKWSMDN------NKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANML-IELH 596
           I+W+          K G    H  +A+          A  HFL S D  ++AN L  E  
Sbjct: 126 IQWTKQKATTPIEKKYGSAAFHTVLAKKLVAVDHVELAKNHFLLSDDFKSFANFLHQEYE 185

Query: 597 TTKGLKSEIDLFIAQAVLQIL 659
           + K  +SE ++ I +AV Q L
Sbjct: 186 SFKQKESEPEVIIVEAVFQSL 206


>AF043706-5|ABP57808.1|  536|Caenorhabditis elegans Hypothetical
           protein ZC123.4b protein.
          Length = 536

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 20/41 (48%), Positives = 24/41 (58%)
 Frame = +2

Query: 212 NSEKISRIVNFIVQRVYTSFGTRSTRKWS*SRHTLRRSFNK 334
           +SE + RI     QR+    G+ STRK S S  TLRRS NK
Sbjct: 44  SSENLHRITTMSPQRIQDVDGSPSTRKPSSSIFTLRRSRNK 84


>AF043706-3|ABP57807.1|  534|Caenorhabditis elegans Hypothetical
           protein ZC123.4a protein.
          Length = 534

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 20/41 (48%), Positives = 24/41 (58%)
 Frame = +2

Query: 212 NSEKISRIVNFIVQRVYTSFGTRSTRKWS*SRHTLRRSFNK 334
           +SE + RI     QR+    G+ STRK S S  TLRRS NK
Sbjct: 44  SSENLHRITTMSPQRIQDVDGSPSTRKPSSSIFTLRRSRNK 84


>Z69885-3|CAA93755.1|  278|Caenorhabditis elegans Hypothetical
           protein T04C10.3 protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/69 (24%), Positives = 37/69 (53%)
 Frame = +3

Query: 315 FVEVLTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSMDNNKKGDPLLHKKI 494
           F ++L     K   E + +L + F+L+  ++    + L +S+K  ++ +KK   +L KK+
Sbjct: 174 FTDLLQDFFQKRRVEKLRQLVEEFDLVLITMGNIYSQLNDSMKSDLEASKKQKTILDKKL 233

Query: 495 AEVFWKEKK 521
           +++  K  K
Sbjct: 234 SDLLQKTTK 242


>Z92829-9|CAB07349.1|  360|Caenorhabditis elegans Hypothetical
           protein F10A3.13 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 573 HMLNHPMSVKSVYEQLCTFFPSKILLLFSCVGVG 472
           + L   + +++++  L  FFP+  L+LF   GVG
Sbjct: 249 YQLFKTLLIQTIFPSLLVFFPAACLILFPAFGVG 282


>AC006714-10|AAK29727.2|  253|Caenorhabditis elegans F-box a protein
           protein 21 protein.
          Length = 253

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 489 KIAEVFWKEKKYTAAHRHFLHSSDGSAY 572
           +I  VFW E      H +F+HS D S++
Sbjct: 204 EIVRVFWPEYNGNYHHNNFIHSFDSSSF 231


>U97009-12|ABR92602.1|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform b protein.
          Length = 532

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = -2

Query: 526 VYFFSFQNTSAIFLCRSGSPFLLLSIDHFIEFVRKVSRSGTLELINSNNFANFETHSSLG 347
           +Y   F N +   LC+  + F+  +I H +   R + +   + + NSN++ +F   ++  
Sbjct: 209 LYRIFFWNLTTQRLCQFQNDFIQKAIGHPVPHWRDLVKESPIYITNSNSYLDFAVPTTAT 268

Query: 346 LV 341
           +V
Sbjct: 269 IV 270


>U97009-11|AAC69026.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform a protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = -2

Query: 526 VYFFSFQNTSAIFLCRSGSPFLLLSIDHFIEFVRKVSRSGTLELINSNNFANFETHSSLG 347
           +Y   F N +   LC+  + F+  +I H +   R + +   + + NSN++ +F   ++  
Sbjct: 210 LYRIFFWNLTTQRLCQFQNDFIQKAIGHPVPHWRDLVKESPIYITNSNSYLDFAVPTTAT 269

Query: 346 LV 341
           +V
Sbjct: 270 IV 271


>Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical
           protein F11A5.9 protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 519 FFPSKILLLFSCVGVGHLFCCYPLTILL 436
           + PS+  LLFS V VG +   YP+ +L+
Sbjct: 104 YSPSEKSLLFSLVAVGAMVAVYPVMLLI 131


>U53336-8|AAA96180.2|  326|Caenorhabditis elegans Aurora/ipl1
           related kinase protein1 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 375 AKLFELISSSVPERETFLTNSIKWSMDNNKKGDPLLHKKIAEVFWKEKKYT 527
           A++  L   S P+R         WS+D+   G PL   K   VF   +K T
Sbjct: 16  AEVISLTEDSRPQRVDQAREESCWSLDDFDVGRPLGKGKFGNVFISREKKT 66


>AF071206-1|AAC70944.1|  326|Caenorhabditis elegans
           aurora/Ipl1-related protein kinase1 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 375 AKLFELISSSVPERETFLTNSIKWSMDNNKKGDPLLHKKIAEVFWKEKKYT 527
           A++  L   S P+R         WS+D+   G PL   K   VF   +K T
Sbjct: 16  AEVISLTEDSRPQRVDQAREESCWSLDDFDVGRPLGKGKFGNVFISREKKT 66


>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
           protein R155.3 protein.
          Length = 1165

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 445 HFIEFVRKVSRSGTLELINSNNFANFETHSSLGLV-SDFVKTSTKSMARS 299
           H I+    V+ + TL L+  NN++  ET  +  +V S   K  T S+A S
Sbjct: 59  HLIKLKASVTYTQTLSLVKYNNYSQKETVKNSEVVYSSLQKVYTSSIALS 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,531,242
Number of Sequences: 27780
Number of extensions: 333310
Number of successful extensions: 877
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)