Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21a05
(583 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 193 1e-50
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 191 6e-50
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 100 3e-22
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 85 5e-18
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.37
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 27 2.0
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 2.6
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 26 3.5
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 26 4.6
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 26 4.6
SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|... 26 4.6
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 26 4.6
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 6.1
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 8.1
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 8.1
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 193 bits (471), Expect = 1e-50
Identities = 83/176 (47%), Positives = 122/176 (69%), Gaps = 4/176 (2%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGK 226
M+EI+ IH+GQAG Q NACWELYCLEHGI+P+G + A ++D FFSETG GK
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 227 FVPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALN 406
+VPR + +DLEP ID++RTG YR LFH LITGKEDA++N+ARG++ VG+E++D +
Sbjct: 61 YVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTD 120
Query: 407 RIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPSTE 574
+IR + ++C +QGF+VF LE ++ ++ K SK+++++YP+ +
Sbjct: 121 KIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQ 176
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 191 bits (466), Expect = 6e-50
Identities = 84/180 (46%), Positives = 122/180 (67%), Gaps = 8/180 (4%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLA-----FPDN---DNSCGHFFSET 214
M+E++ +H+GQAGVQ NACWELYCLEHGI PDG +N ++ G FFSET
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSET 60
Query: 215 GAGKFVPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLD 394
G GKFVPR + +DLEP ID++RTG Y+ LFH ++TGKEDA++N+ARG++ VG+EM+D
Sbjct: 61 GQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMID 120
Query: 395 VALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPSTE 574
L RIR + ++C +QGF+VF LE ++ ++GK S +++++YP+ +
Sbjct: 121 SVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVYPAPQ 180
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 99.5 bits (237), Expect = 3e-22
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL--AFPDNDNSCGHFFSETGAGKFV 232
M+EI+HI GQ G Q A W EHG+ G+ +F+E GK+V
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGGKYV 60
Query: 233 PRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 412
PR V++DLEP +D +++G + LF ++I G+ A + +A+G++ G E+ D L+ +
Sbjct: 61 PRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVV 120
Query: 413 RSVTEDCDNIQGF 451
R E CD +QGF
Sbjct: 121 RREAEACDALQGF 133
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 85.4 bits (202), Expect = 5e-18
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Frame = +2
Query: 62 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL-AF-PDNDNSCGHFFSETGAGKFVP 235
+EI+ + GQ G Q + W+ CLEHGI PDG L +F + + FF ++ +++P
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDDTRYIP 62
Query: 236 RVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKE--DAASNFARGYFGVGREMLDVALNR 409
R ++IDLEP ++ I + Y L++ +++ K A +N+A GY R D+ ++
Sbjct: 63 RAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANGYSHAERIFEDI-MDM 121
Query: 410 IRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPSTENIS 583
I + D+++GF + LE ++ + K Y+++P+++++S
Sbjct: 122 IDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVS 179
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.37
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = -2
Query: 492 KPEPVPPPNARNTIKP*ILSQSSVTDRMRFKATSNISRPTPK*PRAKLLAASSLPVIREE 313
+P P PPP+ RN KP I + SS S++ P P PR+ AA S+P+ +
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSS---------NSSLPPPPPP-PRSN--AAGSIPLPPQG 357
Query: 312 EWKSCRYTPVLISSMGVGSKSIITTRG-TNFPAP---VSLKKCPQLLSLSGNARTPSGLI 145
P S G + ++R +N PAP + + P L L +RT + +
Sbjct: 358 RSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPV 417
Query: 144 P 142
P
Sbjct: 418 P 418
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 27.1 bits (57), Expect = 2.0
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 306 KSCRYTPVLISSMGVGSKSIITTRGTNFPAPVSLKKCPQLLSLSGNARTPSGLIPCS 136
KS T V + + +G + T + PV KK QL S ++ +PS +IP S
Sbjct: 398 KSLLNTVVGMDIVSLGKVPLFLTPIVRYKNPVKNKKRSQLTSRISSSVSPSNVIPNS 454
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 2.6
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -2
Query: 534 FPKSREILSRSKAVKPEPVPPPNARNTIKP*ILSQSSVTDRMRFKATSNISRPTPK*PRA 355
FP + L AVK +P PPP +N P + SS M+++ T+ + P P
Sbjct: 189 FPSNYVRLLEDSAVKAQPPPPPPQQN-YPP---AASSSAPPMQYQQTAYPPQQAPYPPVQ 244
Query: 354 KLLAASSLPVI 322
A P++
Sbjct: 245 AYPQAPQQPIV 255
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 26.2 bits (55), Expect = 3.5
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 460 SSVWRGNRFWFHSFTSGKYFTRFWETVQNRV-RDLPQHRK 576
SS+ FWF FT KY + + N V + P R+
Sbjct: 37 SSILNTTAFWFVEFTESKYDKEEFSVIWNEVSMEFPDIRR 76
>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 78 YTLDKPVCKPLTPVGNCIVLNT 143
Y LD + + +TP CIVLNT
Sbjct: 96 YNLDTAIKEVVTPGHTCIVLNT 117
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 4.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 143 GIRPDGVLAFPDNDNSCGHFFSETGAGKFVPRVVMIDLEPTPIDEI 280
G+ PDG F N N+ HF G F V+ D+ I+ +
Sbjct: 126 GLMPDGTSRFSCNGNTLLHFM---GCSTFSEYTVVADISVVAIERL 168
>SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 162
Score = 25.8 bits (54), Expect = 4.6
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 438 LSQSSVTDRMRFKATSNI--SRPTPK*PRAKLLAASSLPVIREEEWKS 301
L +S+ TD R+ N R + + +L ++ I+EEEWKS
Sbjct: 26 LQESTETDTSRYMDMENYIQKRVQDELKQLQLRQKKAIDAIQEEEWKS 73
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 209 ETGAGKFVPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGK 334
E A FVP ++ + L+ P + Y Q F S +TG+
Sbjct: 292 EESADMFVPILIFVVLQARPAHLVSNIQYIQRFRSPEKLTGE 333
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = -2
Query: 582 EIFSVLG*IAYSILDSFPKSREILSRSKAVKPEPVPPPNARNTIKP*ILSQS 427
EI S + L S PK+RE +P PN + P L Q+
Sbjct: 9 EISSKFASLGLGSLKSTPKARETTEPPPPSSQQPPSTPNGKEAASPSALKQN 60
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 439 YSGLYCISSVWRGNRFWFHSFTSG 510
Y+ C+++V R NRFW G
Sbjct: 747 YNENVCVAAVLRNNRFWIEVLEFG 770
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 98 HRLVQCVCVEFLSFSINHCKFW 33
H+++QC V FLSF I+ C W
Sbjct: 958 HQVLQCKDVSFLSF-ISDCLKW 978
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,585,032
Number of Sequences: 5004
Number of extensions: 56178
Number of successful extensions: 183
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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