Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte21a05
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 208 2e-54
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 208 3e-54
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 205 2e-53
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 141 3e-34
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 122 3e-28
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 119 2e-27
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 113 1e-25
03_01_0034 + 318432-318825,318902-319851 113 1e-25
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 113 1e-25
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 112 2e-25
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 111 5e-25
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 103 1e-22
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 83 1e-16
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 29 2.7
05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128... 29 2.7
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 29 3.6
01_07_0127 + 41234826-41236136 29 3.6
01_01_0871 + 6813091-6814212 28 4.7
09_06_0184 - 21413275-21414267 28 6.2
06_02_0239 + 13384451-13387124,13387234-13387631 28 6.2
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 28 6.2
11_01_0333 + 2490132-2491007 27 8.2
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 27 8.2
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 208 bits (508), Expect = 2e-54
Identities = 96/177 (54%), Positives = 123/177 (69%), Gaps = 5/177 (2%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDNDNSCGH-----FFSETGAG 223
M+EI+ IHIGQAG+Q NACWELYCLEHGI PDG + D H FFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMP-SDTTVGVAHDAFNTFFSETGAG 59
Query: 224 KFVPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVAL 403
K VPR + +DLEPT IDE+RTG YRQLFH LI+GKEDAA+NFARG++ VG+E++D+ L
Sbjct: 60 KHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
Query: 404 NRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPSTE 574
+R+R + ++C +QGF+VF LE +S D+GK SK+ + IYPS +
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQ 176
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 208 bits (507), Expect = 3e-54
Identities = 94/176 (53%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGK 226
M+E + IHIGQAG+Q NACWELYCLEHGI+PDG + D++ FFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 FVPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALN 406
VPR V +DLEPT IDE+RTG YRQLFH LI+GKEDAA+NFARG++ +G+E++D+ L+
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 407 RIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPSTE 574
RIR + ++C +QGF+VF LE +S D+GK SK+ + +YPS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 205 bits (500), Expect = 2e-53
Identities = 93/176 (52%), Positives = 122/176 (69%), Gaps = 4/176 (2%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGK 226
M+E + IHIGQAG+Q NACWELYCLEHGI+ DG + D++ FFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 227 FVPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALN 406
VPR V +DLEPT IDE+RTG YRQLFH LI GKEDAA+NFARG++ +G+E++D+ L+
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 407 RIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPSTE 574
RIR + ++C +QGF+VF LE +S D+GK SK+ + +YPS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 141 bits (342), Expect = 3e-34
Identities = 63/125 (50%), Positives = 88/125 (70%)
Frame = +2
Query: 200 FFSETGAGKFVPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVG 379
FFSET +GK VPR + +DLEPT IDE++TG YRQLFH LI+ KEDAA+NFARG++ VG
Sbjct: 112 FFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVG 171
Query: 380 REMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAI 559
RE++D+ L+R+R + ++C +QGF+VF LE +S D+G+ SK+ + I
Sbjct: 172 REVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTI 231
Query: 560 YPSTE 574
YPS +
Sbjct: 232 YPSPQ 236
Score = 70.1 bits (164), Expect = 1e-12
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL 166
M+EI+ IHIGQAG+Q N+CWELYCLEHGI+PDG++
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLM 36
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 122 bits (293), Expect = 3e-28
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Frame = +2
Query: 56 KMKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDNDN--SCGHFFSETGAGKF 229
KM+EILHI GQ G Q + WE+ C EHGI P G A + +++E G+F
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 230 VPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNR 409
VPR V++DLEP +D +RTG Y Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 240 VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 299
Query: 410 IRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPS 568
+R E+CD +QGF V + I ++ + ++++PS
Sbjct: 300 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 352
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 119 bits (286), Expect = 2e-27
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDG-VLAFPDND-NSCGHFFSETGAGKFV 232
M+EILHI GQ G Q + WE+ C EHGI P G + D +++E G+FV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 233 PRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 412
PR V++DLEP +D +RTG Y Q+F + + G+ A +N+A+G++ G E++D L+ +
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 413 RSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPS 568
R E+CD +QGF V + I ++ + ++++PS
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 113 bits (272), Expect = 1e-25
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDND---NSCGHFFSETGAGKF 229
M+EILHI GQ G Q WE+ C EHGI G + D+D +++E G++
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYS-GDSDLQLERINVYYNEASGGRY 59
Query: 230 VPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNR 409
VPR V++DLEP +D +R+G Y Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 410 IRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPS 568
+R E+CD +QGF V + I ++ + ++++PS
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 113 bits (272), Expect = 1e-25
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDND---NSCGHFFSETGAGKF 229
M+EILHI GQ G Q WE+ C EHGI G D+D +++E G+F
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYD-GDSDLQLERVNVYYNEASCGRF 59
Query: 230 VPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNR 409
VPR V++DLEP +D +R+G Y +F + + G+ A +N+A+G++ G E++D L+
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 119
Query: 410 IRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPS 568
+R E+CD +QGF V + I ++ + ++++PS
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 113 bits (271), Expect = 1e-25
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDND---NSCGHFFSETGAGKF 229
M+EILHI GQ G Q WE+ C EHGI G + D+D +++E G+F
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYS-GDSDLQLERINVYYNEASGGRF 59
Query: 230 VPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNR 409
VPR V++DLEP +D +R+G + Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 410 IRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPS 568
+R E+CD +QGF V + I ++ + ++++PS
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 112 bits (270), Expect = 2e-25
Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDND---NSCGHFFSETGAGKF 229
M+EILHI GQ G Q WE+ C EHG+ G A D+D +++E G++
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYA-GDSDLQLERINVYYNEASGGRY 59
Query: 230 VPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNR 409
VPR V++DLEP +D +R+G + Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 410 IRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPS 568
+R E+CD +QGF V + I ++ + ++++PS
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 111 bits (266), Expect = 5e-25
Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDNDN----SCGHFFSETGAGK 226
M+EILHI GQ G Q WE+ C EHGI P G + N + +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTG--RYTGNSDLQLERVNVYYNEASCGR 58
Query: 227 FVPRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALN 406
FVPR V++DLEP +D +RTG Y Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 407 RIRSVTEDCDNIQG 448
+R E+CD +QG
Sbjct: 119 VVRKEAENCDCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 103 bits (247), Expect = 1e-22
Identities = 50/137 (36%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +2
Query: 59 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLA--FPDNDNSCGHFFSETGAGKFV 232
M+EILHI GQ G Q WE+ C EHG+ P G P +F+E G+ V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 233 PRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 412
PR V++DLEP +D +R+G +F + + G+ A +N+A+G++ G E++D L+ +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 413 RSVTEDCDNIQGFIVFR 463
R E+CD +Q V R
Sbjct: 121 RKEAENCDCLQDNRVIR 137
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 83.4 bits (197), Expect = 1e-16
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Frame = +2
Query: 62 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL---AFPDNDNSCGHFFSETGAGKFV 232
+EI+ I +GQ G Q W+ CLEHGI DG+L A D FF + ++
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRK-DVFFYQADDQHYI 61
Query: 233 PRVVMIDLEPTPIDEIRTGVYRQLFHSSSLITGKE--DAASNFARGYFGVGREMLDVALN 406
PR +++DLEP I+ I+ YR L++ ++ + A +N+A GY G +++D ++
Sbjct: 62 PRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYH-QGEQVVDDIMD 120
Query: 407 RIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSKIEYAIYPS 568
I + D+++GF++ LE+++ + K Y+++P+
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN 174
>08_02_0076 + 11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 173 PDNDNSCGHFFSETGAGKFVP-RVVMIDLEPTPIDEIRTGVYRQLFHSS---SLITGKED 340
P + NS HF S+ G G+FV + ++I+ PT + +G + SS +TG +D
Sbjct: 1194 PSDANSIMHFTSKKGLGRFVSLKKIVIENCPTLLSRALSGGASHISPSSLDKLCMTGIQD 1253
Query: 341 AASNFA 358
+ F+
Sbjct: 1254 STLQFS 1259
>05_05_0132 -
22611030-22611908,22612016-22612135,22612644-22612856,
22612968-22613288,22613421-22613504
Length = 538
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -2
Query: 531 PKSREILSRSKAVKPEPVPPPNARNT-IKP*ILSQSSVTDRMRFKATSNISRPTPK*PRA 355
P +R+ P+ PP R+ IK S ++ + + ++RPT PRA
Sbjct: 55 PSARQQPHHHHPPPPQAAPPDRQRDDGIKEAKSSDAAAAAAQKTATATAVTRPTTTAPRA 114
Query: 354 KLLAASSLPVIREEEWKSCR 295
+A L ++ + K+CR
Sbjct: 115 PARSAEELAAVKIQ--KACR 132
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 KFVPRVVMIDLEPTPIDEIRTGVYRQLF 307
K+ P +IDL+P P+ +R Y L+
Sbjct: 1298 KYAPPTELIDLQPLPVTALRNARYESLY 1325
>01_07_0127 + 41234826-41236136
Length = 436
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 293 YRQLFHSSSLITGKEDAASNFARGYFGVG 379
YRQ S +T K S F RG+ G+G
Sbjct: 383 YRQFGCSLEFVTNKSQEGSQFVRGFGGIG 411
>01_01_0871 + 6813091-6814212
Length = 373
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 549 SILDSFPKSREILSRSKAVKPEPVPPP 469
S+L SFP S + + A K +P PPP
Sbjct: 248 SVLRSFPPSAVVATADTANKKQPPPPP 274
>09_06_0184 - 21413275-21414267
Length = 330
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 549 SILDSFPKSREILSRSKAVKPE-PVPPPNARNTIKP 445
S+ +FP R + S + P PVPPP+AR+ P
Sbjct: 87 SMESTFPSPRPPSTPSSSTPPSSPVPPPSARSPTVP 122
>06_02_0239 + 13384451-13387124,13387234-13387631
Length = 1023
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 228 NFPAPVSLKKCPQLLSLSGNARTPSGLIP 142
N PVS+ KC L SLS + + SG+IP
Sbjct: 535 NGSIPVSIGKCQSLQSLSLSRNSLSGVIP 563
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 158 GVLAFPDNDNSCGHFFSETGAGKFVPRVVMID 253
G + FPDN+ + + TG+ FVP + ID
Sbjct: 198 GKVGFPDNEITARNIIIATGSVPFVPNGIEID 229
>11_01_0333 + 2490132-2491007
Length = 291
Score = 27.5 bits (58), Expect = 8.2
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = -2
Query: 531 PKSREILSRSKA-VKPEPVPPPNARNTIKP*ILSQSSVTDRMRFKATSNISRPT-PK*PR 358
P + L+R+ A P P PPP R T+ ++ ++ D K+ + S K PR
Sbjct: 56 PPVVDSLARAAARPSPSPPPPPPPRRTVSWLDITDAATADNDNDKSKDDSSLDALLKPPR 115
Query: 357 AKLLAASSLPVIREEEWKSCRYTPVLISSMGVGSKSII 244
A+ V R + T +L+ + G+GS+S +
Sbjct: 116 P---ASGGATVKRSASFCLKSSTSLLLCTEGLGSESTV 150
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 163 NSIRSYPVFKTIQFPTGVSGLHTGLSNVYV 74
+ IRS FK + TG+ G+HT +V
Sbjct: 362 DQIRSIAAFKDVHSNTGIFGIHTSTDAAFV 391
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,141,437
Number of Sequences: 37544
Number of extensions: 355540
Number of successful extensions: 1249
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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