Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte21a02
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    38   0.007
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    36   0.022
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    34   0.090
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    32   0.36 
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ...    31   0.84 
AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical ...    31   1.1  
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    30   1.9  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    29   2.6  
AL031627-19|CAA20969.1|  349|Caenorhabditis elegans Hypothetical...    29   3.4  
Z99281-35|CAB16518.2|  524|Caenorhabditis elegans Hypothetical p...    28   5.9  
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    28   7.8  

>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 585 LEKAVAFSSNVNAVCLETSTEDPTVPLTIPGWGKISN 695
           +EK + FS NV  +CL       T  L +PGWG+I N
Sbjct: 150 VEKRIHFSENVRPICLPRPNMYYTKSLAVPGWGRIFN 186


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +3

Query: 417 LDLYILGGEAASMGEFPYMVAVGFDRGNGYEFDCGGSLLSNLYVLTAAHC 566
           LD  ++GG  +S   +P+ V +    G+     CGGSL+   +VLTAAHC
Sbjct: 54  LDHRLIGGSESSPHSWPWTVQLLSRLGH---HRCGGSLIDPNFVLTAAHC 100


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 34.3 bits (75), Expect = 0.090
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 429 ILGGEAASMGEFPYMVAVGFDRGNGYEFDCGGSLLSNLYVLTAAHCVDTLDRL 587
           ++GG     G FP+  A+       +   CG S+L   +++TAAHC +  +R+
Sbjct: 27  VVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHCFEEDERV 77


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 492 RGNGYEFDCGGSLLSNLYVLTAAHC 566
           R   +E  CGG+L++  +VLTAAHC
Sbjct: 54  RKGDFEVICGGTLITLKHVLTAAHC 78


>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
            protein H43E16.1 protein.
          Length = 1203

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 28/95 (29%), Positives = 39/95 (41%)
 Frame = -1

Query: 658  TVGSSVLVSKHTAFTLLENATAFSNRSNVSTQCAAVSTYRLDSNEPPQSNS*PLPRSKPT 479
            TVGSS + S  ++          S  S V+ Q A+ STY   S EP  S++     S   
Sbjct: 777  TVGSSTMGSTQSSLPSSTMTNTGSTGSTVTNQLASSSTYGASSTEPIASSTANPGSSTSG 836

Query: 478  ATM*GNSPIDAASPPSIYRSSGGTVEDMILSHSRS 374
             T        +    S   S+G TV +  +S S S
Sbjct: 837  QTAVTTQGSSSTQTNSNTGSTGSTVTNPPVSSSTS 871


>AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.3 protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
 Frame = +3

Query: 159 DVGDECTPNNQISEGICTLVNDCPQAVMAIKNKRFQPFQRCGFRGFQEIVCCPTTVDKFG 338
           ++ +     N +   +  L+N  P+    +K K F+  +   +    E VCCP    +FG
Sbjct: 135 NINEVAVRTNMLIIRLDRLINGGPKDKDPVKRKEFER-EVVPWLDDAEAVCCPLCASRFG 193

Query: 339 QTEK---TRTIKRIAERECDKIIS 401
            T +    R   R+    C K +S
Sbjct: 194 LTRRRHHCRLCGRVLCHSCSKFLS 217


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 411 PPLDLYILGGEAASMGEFPYMVAVGFDRGNGYEFDCGGSLLSNLYVLTAAHC 566
           P     I+GG +   G   +M  +     NG    CG +++ + +++TAAHC
Sbjct: 32  PIFSFRIIGGNSIDDGA-NWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
 Frame = +3

Query: 363 KRIAERECDKIISSTVPPLDLYILGGEAASMGEFPYMVAVGF-----DRGNGYEFDCGGS 527
           +++   E +K +      +   I  G  A + E P+ V +       +    +   C G+
Sbjct: 19  RKLTAEENEKRLEDCGKNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGT 78

Query: 528 LLSNLYVLTAAHCVDTLDRLE 590
           L S  ++LTA HC  T    E
Sbjct: 79  LTSPRHILTATHCAATYTETE 99


>AL031627-19|CAA20969.1|  349|Caenorhabditis elegans Hypothetical
           protein Y102A5C.31 protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 290 SESTSLKWLKPFIFYCHYSLRTIIHQSTDTFRYLVIWGAFISNVF 156
           S   S+KW+ PF+ +C   L   I   +  +  + I G ++  VF
Sbjct: 43  SRMASVKWMMPFLTFCSAFLDLFIAVFSTQYYLVPIVGGYMRGVF 87


>Z99281-35|CAB16518.2|  524|Caenorhabditis elegans Hypothetical
           protein Y57G11C.17 protein.
          Length = 524

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 722 VIYCFSVPSITYLPPTGDGQWNSWIFCTRF 633
           V+Y FSV  I     TG  +W  W+ C  F
Sbjct: 128 VLYSFSVLVIVATWLTGGSKWTPWLLCIVF 157


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +3

Query: 414 PLDLYILGGEAASMGEFPYMVAVG-FDRGNGYEFDCGGSLLSNLYVLTAAHC 566
           P    +  G  AS  E P+ V    + +       C G+++S  ++L A HC
Sbjct: 158 PFSAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,784,212
Number of Sequences: 27780
Number of extensions: 366307
Number of successful extensions: 1157
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)