Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20p21
         (586 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003581-1|AAH03581.1|  101|Homo sapiens ubiquitin related modif...   122   7e-28
AL359091-10|CAI13493.1|  101|Homo sapiens ubiquitin related modi...   122   7e-28
AL359091-9|CAI13492.1|   63|Homo sapiens ubiquitin related modif...    62   1e-09

>BC003581-1|AAH03581.1|  101|Homo sapiens ubiquitin related modifier
           1 homolog (S. cerevisiae) protein.
          Length = 101

 Score =  122 bits (295), Expect = 7e-28
 Identities = 59/108 (54%), Positives = 76/108 (70%)
 Frame = +3

Query: 219 AETLTVXVMFGGGAELLFNKVKRKEIALPPLKTFLPDSXNXNWTLXELLIWLKDNLLVER 398
           A  L+V V FGGGAELLF+ +K+  + LP             W +  LLIW+K NLL ER
Sbjct: 2   AAPLSVEVEFGGGAELLFDGIKKHRVTLP--------GQEEPWDIRNLLIWIKKNLLKER 53

Query: 399 EELFLKDDSVRPGILVLINEEDWELHGQLNYELKENDKIMFISTLHGG 542
            ELF++ DSVRPGILVLIN+ DWEL G+L+Y+L++ D ++FISTLHGG
Sbjct: 54  PELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSVLFISTLHGG 101


>AL359091-10|CAI13493.1|  101|Homo sapiens ubiquitin related
           modifier 1 homolog (S. cerevisiae) protein.
          Length = 101

 Score =  122 bits (295), Expect = 7e-28
 Identities = 59/108 (54%), Positives = 76/108 (70%)
 Frame = +3

Query: 219 AETLTVXVMFGGGAELLFNKVKRKEIALPPLKTFLPDSXNXNWTLXELLIWLKDNLLVER 398
           A  L+V V FGGGAELLF+ +K+  + LP             W +  LLIW+K NLL ER
Sbjct: 2   AAPLSVEVEFGGGAELLFDGIKKHRVTLP--------GQEEPWDIRNLLIWIKKNLLKER 53

Query: 399 EELFLKDDSVRPGILVLINEEDWELHGQLNYELKENDKIMFISTLHGG 542
            ELF++ DSVRPGILVLIN+ DWEL G+L+Y+L++ D ++FISTLHGG
Sbjct: 54  PELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSVLFISTLHGG 101


>AL359091-9|CAI13492.1|   63|Homo sapiens ubiquitin related modifier
           1 homolog (S. cerevisiae) protein.
          Length = 63

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = +3

Query: 219 AETLTVXVMFGGGAELLFNKVKRKEIALPPLKTFLPDSXNXNWTLXELLIWLKDNLLVER 398
           A  L+V V FGGGAELLF+ +K+  + LP             W +  LLIW+K NLL ER
Sbjct: 2   AAPLSVEVEFGGGAELLFDGIKKHRVTLP--------GQEEPWDIRNLLIWIKKNLLKER 53

Query: 399 EELFLKDDSV 428
            ELF++ DSV
Sbjct: 54  PELFIQGDSV 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,521,019
Number of Sequences: 237096
Number of extensions: 1267102
Number of successful extensions: 1934
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1931
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)