Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20p18
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 3.8
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 3.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 3.8
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 3.8
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 23 3.8
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 5.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 5.0
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 6.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.8
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 21 8.8
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 162 IYKKV--WISKLKENLPKLQQQVIN 230
IYK + + K KENLPK + +N
Sbjct: 420 IYKTILDYYHKYKENLPKYTTEELN 444
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 192 KENLPKLQQQVINSNSIHMTYNCTKFHRLKTSLYKNL 302
KE + ++I+S S + YN + +L + YK L
Sbjct: 71 KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKL 107
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 192 KENLPKLQQQVINSNSIHMTYNCTKFHRLKTSLYKNL 302
KE + ++I+S S + YN + +L + YK L
Sbjct: 71 KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKL 107
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 162 IYKKV--WISKLKENLPKLQQQVIN 230
IYK + + K KENLPK + +N
Sbjct: 420 IYKTILDYYHKYKENLPKYTTEELN 444
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 162 IYKKV--WISKLKENLPKLQQQVIN 230
IYK + + K KENLPK + +N
Sbjct: 46 IYKTILDYYHKYKENLPKYTTEELN 70
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 197 KSTKTPATGNQFELYPHDLQL 259
K T + +FE YPHD Q+
Sbjct: 125 KLTLVLSCAMKFESYPHDTQI 145
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 174 VWISKLKENLPKL 212
VWI+ L NLPKL
Sbjct: 591 VWINCLDPNLPKL 603
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 250 VMWIEFELITCCWSFGRFSFN 188
V + F+ TC FG ++FN
Sbjct: 155 VTYFPFDQQTCIMKFGSWTFN 175
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 204 VDFLLTLKSILFYIFNNYF*PLLCYK 127
++F+L++ + + N + P LCYK
Sbjct: 26 IEFILSVVGLAIGLGNLWRFPYLCYK 51
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 204 VDFLLTLKSILFYIFNNYF*PLLCYK 127
++F+L++ + + N + P LCYK
Sbjct: 79 IEFILSVVGLAIGLGNLWRFPYLCYK 104
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +2
Query: 446 LCEKSGCGSTKADFEARRKDHIAHFILRLAYCRTEEL 556
LC K+ AD A R++ I YC L
Sbjct: 15 LCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSL 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,276
Number of Sequences: 438
Number of extensions: 3298
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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