Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20p17
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023506-1|AAH23506.1|  222|Homo sapiens chromosome X open readi...   220   3e-57
AK026618-1|BAB15510.1|  222|Homo sapiens NA.  protein.                220   3e-57
AC004000-2|AAB96348.1|   81|Homo sapiens WUGSC:H_DJ404F18.2 prot...    48   3e-05
BC047590-1|AAH47590.1|  979|Homo sapiens HEAT repeat containing ...    31   3.4  

>BC023506-1|AAH23506.1|  222|Homo sapiens chromosome X open reading
           frame 56 protein.
          Length = 222

 Score =  220 bits (538), Expect = 3e-57
 Identities = 106/169 (62%), Positives = 137/169 (81%), Gaps = 4/169 (2%)
 Frame = +1

Query: 142 MPKVVSRSIVCSDTKDQEEYNE-TKPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVID 318
           MPKVVSRS+VCSDT+D+EEY++  KPLH+YYCLCGQM L+LDC ++KLP+RP D +RVID
Sbjct: 1   MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVID 60

Query: 319 GSKHAHKI-TSDPDETVYLRREKGIERQYRLKCKKCALPIYYK-HDQESNVAFIIDGALV 492
            +KHAHK   ++ +ET+YLRR +GIERQYR KC KC LP++Y+   + + V FI+DGA+V
Sbjct: 61  AAKHAHKFCNTEDEETMYLRRPEGIERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVV 120

Query: 493 QTPGEG-GVTDIYKQVALTQPKKIMVTKHTKNMGKFSSVTVSTIDEEED 636
           +  G+G G T+IY Q     PKK+M+TK TK+MGKFSSVTVSTIDEEE+
Sbjct: 121 KF-GQGFGKTNIYTQ-KQEPPKKVMMTKRTKDMGKFSSVTVSTIDEEEE 167


>AK026618-1|BAB15510.1|  222|Homo sapiens NA.  protein.
          Length = 222

 Score =  220 bits (538), Expect = 3e-57
 Identities = 106/169 (62%), Positives = 137/169 (81%), Gaps = 4/169 (2%)
 Frame = +1

Query: 142 MPKVVSRSIVCSDTKDQEEYNE-TKPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVID 318
           MPKVVSRS+VCSDT+D+EEY++  KPLH+YYCLCGQM L+LDC ++KLP+RP D +RVID
Sbjct: 1   MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVID 60

Query: 319 GSKHAHKI-TSDPDETVYLRREKGIERQYRLKCKKCALPIYYK-HDQESNVAFIIDGALV 492
            +KHAHK   ++ +ET+YLRR +GIERQYR KC KC LP++Y+   + + V FI+DGA+V
Sbjct: 61  AAKHAHKFCNTEDEETMYLRRPEGIERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVV 120

Query: 493 QTPGEG-GVTDIYKQVALTQPKKIMVTKHTKNMGKFSSVTVSTIDEEED 636
           +  G+G G T+IY Q     PKK+M+TK TK+MGKFSSVTVSTIDEEE+
Sbjct: 121 KF-GQGFGKTNIYTQ-KQEPPKKVMMTKRTKDMGKFSSVTVSTIDEEEE 167


>AC004000-2|AAB96348.1|   81|Homo sapiens WUGSC:H_DJ404F18.2
           protein.
          Length = 81

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +1

Query: 559 IMVTKHTKNMGKFSSVTVSTIDEEED 636
           +M+TK TK+MGKFSSVTVSTIDEEE+
Sbjct: 1   VMMTKRTKDMGKFSSVTVSTIDEEEE 26


>BC047590-1|AAH47590.1|  979|Homo sapiens HEAT repeat containing 4
           protein.
          Length = 979

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +1

Query: 349 DPDETVYLRREKGIERQYRLKCKKCALPIYYKHDQESNVAFIIDGALVQTPGEGGVTDIY 528
           + +ET     +  I      K  +  LP+YY+       A  ++      PG     DI+
Sbjct: 216 EAEETAEFEDQSVILPPQEKKKPELLLPVYYRLPSYFQQAETVE----IMPGNKSTEDIH 271

Query: 529 KQVALTQPK-KIMVTKHTKNMGKFSSVTVSTIDEE 630
           ++ +L+QP+ +    + T   GKF+  T +T ++E
Sbjct: 272 EKTSLSQPQTQSYFRQVTPRAGKFAYSTDNTFEQE 306


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,636,992
Number of Sequences: 237096
Number of extensions: 1929011
Number of successful extensions: 3600
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3592
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)