Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20p17
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113531-1|AAM29536.1|  247|Drosophila melanogaster RE60835p pro...   205   5e-53
AE014134-2402|AAF53334.1|  247|Drosophila melanogaster CG16865-P...   205   5e-53

>AY113531-1|AAM29536.1|  247|Drosophila melanogaster RE60835p
           protein.
          Length = 247

 Score =  205 bits (500), Expect = 5e-53
 Identities = 104/192 (54%), Positives = 136/192 (70%), Gaps = 27/192 (14%)
 Frame = +1

Query: 142 MPKVVSRSIVCSDTKDQEEYNETKPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVIDG 321
           MPKVVSRSIVCSDTKDQEEYNE KPL+IYYCLC +M+LILDCT+++LPLR  D+ARVI+ 
Sbjct: 1   MPKVVSRSIVCSDTKDQEEYNEEKPLNIYYCLCNKMALILDCTLEQLPLREVDNARVINA 60

Query: 322 SKHAHKITSDP-DETVYLRRE---KGIERQYRLKCKKCALPIYYKHDQESNVAFIIDGAL 489
           + HA+K+T +P    VY++R+    GIE+QYR KC+ C+LP+YY+H  +S+V F++  AL
Sbjct: 61  NDHANKLTHNPTPRMVYIKRKSRGNGIEKQYRYKCRSCSLPLYYRHSPDSHVTFVMSNAL 120

Query: 490 VQTPGEGGVTDI--------YKQVAL---------------TQPKKIMVTKHTKNMGKFS 600
           ++  GE  +T +        +K  A                   KK++VT+HTKNMGKFS
Sbjct: 121 IRNKGESPLTQLLNSEIKGSFKAPAAKPATSAGPDDSGIVDASGKKVVVTRHTKNMGKFS 180

Query: 601 SVTVSTIDEEED 636
           SVTVSTIDEEED
Sbjct: 181 SVTVSTIDEEED 192


>AE014134-2402|AAF53334.1|  247|Drosophila melanogaster CG16865-PA
           protein.
          Length = 247

 Score =  205 bits (500), Expect = 5e-53
 Identities = 104/192 (54%), Positives = 136/192 (70%), Gaps = 27/192 (14%)
 Frame = +1

Query: 142 MPKVVSRSIVCSDTKDQEEYNETKPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVIDG 321
           MPKVVSRSIVCSDTKDQEEYNE KPL+IYYCLC +M+LILDCT+++LPLR  D+ARVI+ 
Sbjct: 1   MPKVVSRSIVCSDTKDQEEYNEEKPLNIYYCLCNKMALILDCTLEQLPLREVDNARVINA 60

Query: 322 SKHAHKITSDP-DETVYLRRE---KGIERQYRLKCKKCALPIYYKHDQESNVAFIIDGAL 489
           + HA+K+T +P    VY++R+    GIE+QYR KC+ C+LP+YY+H  +S+V F++  AL
Sbjct: 61  NDHANKLTHNPTPRMVYIKRKSRGNGIEKQYRYKCRSCSLPLYYRHSPDSHVTFVMSNAL 120

Query: 490 VQTPGEGGVTDI--------YKQVAL---------------TQPKKIMVTKHTKNMGKFS 600
           ++  GE  +T +        +K  A                   KK++VT+HTKNMGKFS
Sbjct: 121 IRNKGESPLTQLLNSEIKGSFKAPAAKPATSAGPDDSGIVDASGKKVVVTRHTKNMGKFS 180

Query: 601 SVTVSTIDEEED 636
           SVTVSTIDEEED
Sbjct: 181 SVTVSTIDEEED 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,134,945
Number of Sequences: 53049
Number of extensions: 592498
Number of successful extensions: 1327
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)