Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20p17
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL161712-5|CAC70131.1|  244|Caenorhabditis elegans Hypothetical ...   128   3e-30
CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical ...    31   0.92 
Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z32679-3|CAA83596.1|  401|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine re...    28   4.9  
U28943-10|AAA68362.1|  329|Caenorhabditis elegans Dehydrogenases...    27   8.6  

>AL161712-5|CAC70131.1|  244|Caenorhabditis elegans Hypothetical
           protein Y66D12A.8 protein.
          Length = 244

 Score =  128 bits (310), Expect = 3e-30
 Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
 Frame = +1

Query: 178 DTKDQEEYNETKPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVIDGSKHAHKITSDPD 357
           D  D+EEY   KPL+ YYC CG+M++I D  I+++P R  D ARVI   +   K  + P 
Sbjct: 29  DVDDREEYF-VKPLYTYYCTCGEMAMISDTLINRMPKRERDGARVITPDRTTAKTFAKPG 87

Query: 358 ETVYLRREK--GIERQYRLKCKKCALPIYYKHDQESNVAFIIDGALVQTPGEGGVTDIYK 531
           ETVY++R    G+E+QYR  CKKC++P++Y+H    N  FI+  AL+     GG +   +
Sbjct: 88  ETVYVKRSPAVGLEQQYRKMCKKCSIPLFYQHPSALNRTFILADALLSAQEVGGFSANNE 147

Query: 532 QVALTQPKKIMVTKHTKNMGKFSSVTVSTIDEEED 636
           +    + KK+++ ++ KN GK  SVTVST++ EE+
Sbjct: 148 E---QRAKKVIMKRNVKNQGKMGSVTVSTMEGEEE 179


>CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical
           protein C42C1.8 protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 614 DTVTELNLPMFLVCFVTMIFLGC 546
           D V  LN+ +F++CFV + F GC
Sbjct: 244 DDVWILNVILFIICFVALFFAGC 266


>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 475 IDGAL-VQTPGEGGVTDIYKQVALTQPKKIMVTKHTKNMGKF 597
           +DGAL V TP E  + D+ K+V+     K+ +    +NM +F
Sbjct: 197 LDGALIVSTPQEVSLLDVRKEVSFCVKTKVPILGVVENMARF 238


>Z32679-3|CAA83596.1|  401|Caenorhabditis elegans Hypothetical
           protein C05B5.3 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 557 FLGCVKATCLYISVTPPSPGVWTNAPSI 474
           + GC  + C+  ++ P S G W NA  I
Sbjct: 36  YAGCSSSGCVPATIVPKSSGFWPNADMI 63


>AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical
           protein C16A11.3 protein.
          Length = 726

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 213 TFTYLLLFVRPDVSHIRLYDRQITVKTLRQCKSHRWIETRSQNYFRP 353
           T T  + F++P + H+ + D     +T+RQ K  ++   ++QNY  P
Sbjct: 545 TVTGNVCFIQPSIFHVCVVDFG-NARTIRQDKPPKYALVQTQNYRAP 590


>AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine
           receptor, class x protein6 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 636 IFLFINSRHSHRTELTHVFSMFCDHDLLRLCQSHLFIYI 520
           +FL I   HS+  ++  V+ +FC   +   C   +FIYI
Sbjct: 147 MFLSIEGVHSYSNDILLVYDVFCT-SISTFCYVSVFIYI 184


>U28943-10|AAA68362.1|  329|Caenorhabditis elegans Dehydrogenases,
           short chain protein7 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 499 PGEGGVTDIYKQVALTQPKKIMVTKHTKNMGKFSSVTV 612
           PG G  T I++   L     I+ T  TKN+ + +S TV
Sbjct: 229 PGNGVRTSIFRDSWLVSIASILSTPFTKNISQGASTTV 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,848,665
Number of Sequences: 27780
Number of extensions: 317994
Number of successful extensions: 849
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)